RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SLC25A27O95847 323 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 MS4A1P11836 297 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 GJC2Q5T442 439 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-208ENST00000397204 SIAH1Q8IUQ4 282 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 RPAP2Q8IXW5 612 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-208ENST00000397204 KIF1BPQ96EK5 621 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 IL1RAPL2Q9NP60 686 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 DDX60LQ5H9U9 1706 aaKnown RBP10.57□□□□□ -0.72
CAPN3-208ENST00000397204 ZNF532Q9HCE3 1301 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 PRUNE2Q8WUY3 3088 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 GOLIM4O00461 696 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 IFIT2P09913 472 aaKnown RBP10.56□□□□□ -0.72
CAPN3-208ENST00000397204 FCER1AP12319 257 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 KIAA1755Q5JYT7 1200 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 C1orf53Q5VUE5 145 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 SDR42E1Q8WUS8 393 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 ADAMTS5Q9UNA0 930 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 ATP11BQ9Y2G3 1177 aa10.56□□□□□ -0.72
CAPN3-208ENST00000397204 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 HMMRO75330 724 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 FLOT1O75955 427 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 ADCYAP1R1P41586 468 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 PLS1Q14651 629 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 SNX17Q15036 470 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 LRRC41Q15345 812 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 SHHQ15465 462 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 PRAMEF19Q5SWL8 479 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 C12orf60Q5U649 245 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 LCORLQ8N3X6 602 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 MAML3Q96JK9 1138 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 GUCD1Q96NT3 240 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 DNAJC2Q99543 621 aaKnown RBP10.55□□□□□ -0.72
CAPN3-208ENST00000397204 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 DIS3Q9Y2L1 958 aaKnown RBP10.55□□□□□ -0.72
CAPN3-208ENST00000397204 TACC3Q9Y6A5 838 aa10.55□□□□□ -0.72
CAPN3-208ENST00000397204 MAST2Q6P0Q8 1798 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
CAPN3-208ENST00000397204 CYP2D6P10635 497 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 ATP5JP18859 108 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 CDK8P49336 464 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN3-208ENST00000397204 ICA1Q05084 483 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 ANO1Q5XXA6 986 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 RIOX2Q8IUF8 465 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN3-208ENST00000397204 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 PANK1Q8TE04 598 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN3-208ENST00000397204 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 ARMT1Q9H993 441 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 KANSL2Q9H9L4 492 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 PAG1Q9NWQ8 432 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 MYH1P12882 1939 aa10.54□□□□□ -0.72
CAPN3-208ENST00000397204 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 USP17L21D6R901 530 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 PRKAB2O43741 272 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 RARBP10826 455 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 AKR1B1P15121 316 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 COPB2P35606 906 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 ADD2P35612 726 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 STAT3P40763 770 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 SMAD3P84022 425 aaKnown RBP10.53□□□□□ -0.72
CAPN3-208ENST00000397204 TLE2Q04725 743 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 UBE3CQ15386 1083 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 TRIM60Q495X7 471 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 C16orf86Q6ZW13 317 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 RNF180Q86T96 592 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 SLC44A5Q8NCS7 719 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 BADQ92934 168 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 TINF2Q9BSI4 451 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
CAPN3-208ENST00000397204 MYO5AQ9Y4I1 1855 aaKnown RBP10.53□□□□□ -0.72
CAPN3-208ENST00000397204 TRIM43BA6NCK2 446 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 APBB1O00213 710 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 VWA5AO00534 786 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 MBD4O95243 580 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
CAPN3-208ENST00000397204 KCTD2Q14681 263 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 ZNF792Q3KQV3 632 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 C9orf50Q5SZB4 431 aa10.52□□□□□ -0.73
CAPN3-208ENST00000397204 ZSCAN25Q6NSZ9 544 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms