RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ZNF214Q9UL59 606 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CNPY2Q9Y2B0 182 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 ARVCFO00192 962 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 VWA5AO00534 786 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 BMP1P13497 986 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 AKR1B1P15121 316 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 IGFBP4P22692 258 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 ICA1Q05084 483 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 CLEC10AQ8IUN9 316 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 IL27Q8NEV9 243 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 GLT1D1Q96MS3 346 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 UPF3AQ9H1J1 476 aaKnown RBP10.22□□□□□ -0.77
SCFD1-202ENST00000396629 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 IL23AQ9NPF7 189 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 DCP1AQ9NPI6 582 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-202ENST00000396629 FBXO28Q9NVF7 368 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
SCFD1-202ENST00000396629 BCAR3O75815 825 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 ACRP10323 421 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 CYP2D6P10635 497 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-202ENST00000396629 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 PCSK9Q8NBP7 692 aaKnown RBP10.21□□□□□ -0.77
SCFD1-202ENST00000396629 DYNLL2Q96FJ2 89 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 CCDC17Q96LX7 622 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.77
SCFD1-202ENST00000396629 DNAJC25-GNG10A0A024R161 153 aa10.21□□□□□ -0.78
SCFD1-202ENST00000396629 A0A0U1RQG5 324 aaPredicted RBP10.21□□□□□ -0.78
SCFD1-202ENST00000396629 CD4P01730 458 aa10.21□□□□□ -0.78
SCFD1-202ENST00000396629 ASGR1P07306 291 aa10.21□□□□□ -0.78
SCFD1-202ENST00000396629 GJA9P57773 515 aa10.21□□□□□ -0.78
SCFD1-202ENST00000396629 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.78
SCFD1-202ENST00000396629 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.78
SCFD1-202ENST00000396629 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.78
SCFD1-202ENST00000396629 YBX2Q9Y2T7 364 aaKnown RBP10.21□□□□□ -0.78
SCFD1-202ENST00000396629 GREB1LQ9C091 1923 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 TCRBV5S4A2TA0A5A2 114 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 FGBP02675 491 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 PDE6AP16499 860 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 NKX3-2P78367 333 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 TTF1Q15361 905 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 SDR42E1Q8WUS8 393 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 NECAB3Q96P71 396 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
SCFD1-202ENST00000396629 SLC28A3Q9HAS3 691 aa10.2□□□□□ -0.78
SCFD1-202ENST00000396629 ADCY6O43306 1168 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 C6orf222P0C671 652 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-202ENST00000396629 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
SCFD1-202ENST00000396629 ACVR2BQ13705 512 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 SLC9C2Q5TAH2 1124 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 LCORLQ8N3X6 602 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 TMEM57Q8N5G2 664 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 ZHX1Q9UKY1 873 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-202ENST00000396629 REV3LO60673 3130 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 ZNF532Q9HCE3 1301 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CTAGE5O15320 804 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CYP2C18P33260 490 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CDK8P49336 464 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 AAK1Q2M2I8 961 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 SPC25Q9HBM1 224 aa10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-202ENST00000396629 CHD7Q9P2D1 2997 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-202ENST00000396629 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 C12orf60Q5U649 245 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 FRAT1Q92837 279 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-202ENST00000396629 DDX11Q96FC9 970 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 FGD4Q96M96 766 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 LRFN3Q9BTN0 628 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 TEX13BQ9BXU2 312 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 ABHD16BQ9H3Z7 469 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 KANSL2Q9H9L4 492 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 RIPK3Q9Y572 518 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 MYH7P12883 1935 aa10.18□□□□□ -0.78
SCFD1-202ENST00000396629 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-202ENST00000396629 APBB1O00213 710 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 ATP2A1O14983 1001 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 ERC2O15083 957 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 TFF2Q03403 129 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 SNRNP48Q6IEG0 339 aaKnown RBP10.17□□□□□ -0.78
SCFD1-202ENST00000396629 C16orf86Q6ZW13 317 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 PCDHA11Q9Y5I1 949 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 LRRC37A2A6NM11 1700 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 SMIM22K7EJ46 135 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 PRKAB2O43741 272 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 AACSQ86V21 672 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.17□□□□□ -0.78
SCFD1-202ENST00000396629 SLF1Q9BQI6 1058 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 KATNBL1Q9H079 304 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms