RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 FAM173BQ6P4H8 233 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 CAPN12Q6ZSI9 719 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 DPH5Q9H2P9 285 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 SCOCQ9UIL1 159 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 MAST3O60307 1309 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 LMNB2Q03252 620 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 MYOCDQ8IZQ8 938 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 AATFQ9NY61 560 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL4A3-202ENST00000396578 SGSM2O43147 1006 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 SAT1P21673 171 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 CASP2P42575 452 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 CYP2J2P51589 502 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 RCN2Q14257 317 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 CAPN9O14815 690 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 CDR2Q01850 454 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 TPH2Q8IWU9 490 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 KRT40Q6A162 431 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 KDM5BQ9UGL1 1544 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 ITGA6P23229 1130 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 TRIM42Q8IWZ5 723 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
COL4A3-202ENST00000396578 GNGT2O14610 69 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
COL4A3-202ENST00000396578 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 MTHFSDQ2M296 383 aaKnown RBP15.29■□□□□ 0.04
COL4A3-202ENST00000396578 MED10Q9BTT4 135 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 EFHD1Q9BUP0 239 aa15.29■□□□□ 0.04
COL4A3-202ENST00000396578 PALM3A6NDB9 673 aaPredicted RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 PRPSAP1Q14558 356 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 RAPH1Q70E73 1250 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 RABGGTAQ92696 567 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 C1orf112Q9NSG2 853 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 NUP160Q12769 1436 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 EEF1GP26641 437 aaKnown RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 KAZNQ674X7 775 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 CCDC138Q96M89 665 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 ZC4H2Q9NQZ6 224 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 TMED1Q13445 227 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 ITKQ08881 620 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 ADAT2Q7Z6V5 191 aaKnown RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 KCNJ14Q9UNX9 436 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 S100BP04271 92 aaPredicted RBP15.28■□□□□ 0.04
COL4A3-202ENST00000396578 LCA5Q86VQ0 697 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 HAUS4Q9H6D7 363 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 TIMM10P62072 90 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 GPBP1Q86WP2 473 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 SCINQ9Y6U3 715 aa15.28■□□□□ 0.04
COL4A3-202ENST00000396578 H7C1D1 291 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.04
COL4A3-202ENST00000396578 TXLNGQ9NUQ3 528 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 ZNF215Q9UL58 517 aaPredicted RBP15.27■□□□□ 0.04
COL4A3-202ENST00000396578 ZBTB7BO15156 539 aaPredicted RBP15.27■□□□□ 0.04
COL4A3-202ENST00000396578 GAS7O60861 476 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
COL4A3-202ENST00000396578 KCTD16Q68DU8 428 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 TSPYL6Q8N831 410 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 TRIML1Q8N9V2 468 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 CENPKQ9BS16 269 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 PANK4Q9NVE7 773 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 IL2RBP14784 551 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 CTDSPL2Q05D32 466 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 BFSP1Q12934 665 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 SEPT8Q92599 483 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 SERTAD1Q9UHV2 236 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 STAMQ92783 540 aa15.27■□□□□ 0.04
COL4A3-202ENST00000396578 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.27■□□□□ 0.04
COL4A3-202ENST00000396578 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 DMTNQ08495 405 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 SCHIP1Q9P0W5 487 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 ANAPC5Q9UJX4 755 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 MAP3K7O43318 606 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 PPP2R5AQ15172 486 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 LRRC23Q53EV4 343 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 RAB44Q7Z6P3 723 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 ABTB1Q969K4 478 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 BIN2Q9UBW5 565 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 ARMCX3Q9UH62 379 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 EYA2O00167 538 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 KSR1Q8IVT5 923 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 SKA2Q8WVK7 121 aaPredicted RBP15.27■□□□□ 0.03
COL4A3-202ENST00000396578 TMEM63CQ9P1W3 806 aa15.27■□□□□ 0.03
COL4A3-202ENST00000396578 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 JAK2O60674 1132 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 DDB1Q16531 1140 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms