RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MTX1Q13505 466 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 AOC3Q16853 763 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 SPATS2Q86XZ4 545 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 METTL13Q8N6R0 699 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GADD45GIP1Q8TAE8 222 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 CARD6Q9BX69 1037 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 COL4A3BPQ9Y5P4 624 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 ADCY9O60503 1353 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 SOS2Q07890 1332 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 DISP1Q96F81 1524 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TESPA1A2RU30 521 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 TNNC2P02585 160 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 PHKG2P15735 406 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TECP42680 631 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GTF2IP78347 998 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 SATB1Q01826 763 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CUL4BQ13620 913 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 MIER3Q7Z3K6 550 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 PALM2Q8IXS6 379 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF496Q96IT1 587 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 TEKT3Q9BXF9 490 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6□□□□□ -1.451e-7■■■■□ 22
VPS13C-204ENST00000395898 KCNJ18B7U540 433 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 LPXNO60711 386 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CD19P15391 556 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 KCNJ12Q14500 433 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 RILPQ96NA2 401 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 KRT12Q99456 494 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 HOMER3Q9NSC5 361 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 USP40Q9NVE5 1235 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 USTQ9Y2C2 406 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 HECW2Q9P2P5 1572 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 POLR2MP0CAP2 368 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 INPP5BP32019 993 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 IRX5P78411 483 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 LMNB2Q03252 620 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 VSIG1Q86XK7 387 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CCDC17Q96LX7 622 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CEP170Q5SW79 1584 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 RIOK3O14730 519 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 MYL1P05976 194 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 HSPD1P10809 573 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 YARSP54577 528 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 RNASE9P60153 205 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 PNOCQ13519 176 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 BRD3Q15059 726 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 UBE3CQ15386 1083 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GPBP1Q86WP2 473 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 FANCBQ8NB91 859 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 USP44Q9H0E7 712 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 FOXP1Q9H334 677 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 TPCN1Q9ULQ1 816 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 KCNJ14Q9UNX9 436 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 RABGAP1Q9Y3P9 1069 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 LAMC1P11047 1609 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 FGAP02671 866 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 SCG2P13521 617 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TRAPPC10P48553 1259 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF131P52739 623 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 FAM207AQ9NSI2 230 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 IPO11Q9UI26 975 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 LEMD3Q9Y2U8 911 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TTLL3Q9Y4R7 772 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GOLGA8QA0A0J9YX86 632 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GOLGA8OA6NCC3 632 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GOLGA8NF8WBI6 632 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 ARHGAP4P98171 946 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TMC4Q7Z404 712 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 FBXO11Q86XK2 927 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 JPH2Q9BR39 696 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 RIC8AQ9NPQ8 531 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GOLGA8CPA6NN73 597 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 OR52Z1P0C646 297 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TCP1P17987 556 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PCK1P35558 622 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RAD51AP2Q09MP3 1159 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 MORC3Q14149 939 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 KRT81Q14533 505 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 LONRF2Q1L5Z9 754 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PPP1R2P3Q6NXS1 205 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 LRRC8AQ8IWT6 810 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RNF10Q8N5U6 811 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CDC42BPBQ9Y5S2 1711 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 JAK2O60674 1132 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TROVE2P10155 538 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ASPRV1Q53RT3 343 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF408Q9H9D4 720 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 MYO1AQ9UBC5 1043 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TMEM2Q9UHN6 1383 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CHD1O14646 1710 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ZBTB24O43167 697 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RNF40O75150 1001 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CIAO1O76071 339 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PDE8BO95263 885 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 SPOUT1Q5T280 376 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ZMYND15Q9H091 742 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TAB2Q9NYJ8 693 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms