RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 WWC3Q9ULE0 1092 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 GSG1L2A8MUP6 293 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CETN3O15182 167 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 FGFR2P21802 821 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PRDX5P30044 214 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 TGFB2P61812 414 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 ASIC1P78348 528 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 LETM2Q2VYF4 491 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC181Q5TID7 509 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 XRRA1Q6P2D8 792 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 MAPKAPK5Q8IW41 473 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 ZNF592Q92610 1267 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 BPIFA3Q9BQP9 254 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 EHD4Q9H223 541 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 KCND2Q9NZV8 630 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 MYO1AQ9UBC5 1043 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PCDHB13Q9Y5F0 798 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 GOLGA6L10A6NI86 522 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PRDM1O75626 825 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CDC37Q16543 378 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 ARHGAP27Q6ZUM4 889 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 STK11IPQ8N1F8 1099 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 MSANTD4Q8NCY6 345 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PHKBQ93100 1093 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 FEZ2Q9UHY8 353 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 ZNRF3Q9ULT6 936 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 SKILP12757 684 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CCNA1P78396 465 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 MB21D2Q8IYB1 491 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 VAT1LQ9HCJ6 419 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 BTBD18B2RXH4 712 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 SRGNP10124 158 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 USP11P51784 963 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 SYCP3Q8IZU3 236 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PROM2Q8N271 834 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 TBC1D5Q92609 795 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 PCDHA4Q9UN74 947 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 BZW2Q9Y6E2 419 aaKnown RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 BMP3P12645 472 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 KIAA1328Q86T90 577 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 NLRX1Q86UT6 975 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 NAP1L3Q99457 506 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 FERMT1Q9BQL6 677 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 KCNQ2O43526 872 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 HOXC6P09630 235 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 KRT13P13646 458 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CKAP4Q07065 602 aaKnown RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 GTF3C2Q8WUA4 911 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 CALR3Q96L12 384 aaKnown RBP3.79□□□□□ -1.8
VPS13C-203ENST00000395896 RIC8AQ9NPQ8 531 aa3.79□□□□□ -1.8
VPS13C-203ENST00000395896 AKR1B10O60218 316 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 STX10O60499 249 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 JAK2O60674 1132 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 KCNJ6P48051 423 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 LRP10Q7Z4F1 713 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ENAHQ8N8S7 591 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 NEK9Q8TD19 979 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PPP1R9BQ96SB3 815 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 NCOA5Q9HCD5 579 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 COL4A3BPQ9Y5P4 624 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 IVNS1ABPQ9Y6Y0 642 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 SEC16AO15027 2179 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 XRCC5P13010 732 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ITPK1Q13572 414 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 C12orf60Q5U649 245 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 KRBA2Q6ZNG9 492 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 DCAF4Q8WV16 495 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ATP6V0A1Q93050 837 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 BARHL2Q9NY43 387 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 F8W031 263 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 HSPA1LP34931 641 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC40Q4G0X9 1142 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ADAMTS7Q9UKP4 1686 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PNMA6FA0A0J9YX94 578 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ZBTB5O15062 677 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 BCRP11274 1271 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 LRRC63Q05C16 580 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TROAPQ12815 778 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PDIA5Q14554 519 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PFKFB3Q16875 520 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 LCORLQ8N3X6 602 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 SEL1LQ9UBV2 794 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 RIC1Q4ADV7 1423 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 GOLGA6L10A0A0M3HER8 536 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 IL1R1P14778 569 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 KIF23Q02241 960 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 DHTKD1Q96HY7 919 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ZDHHC15Q96MV8 337 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 LY9Q9HBG7 655 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 VPS54Q9P1Q0 977 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 CAGE1Q8TC20 777 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PIBF1Q8WXW3 757 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 CEP83Q9Y592 693 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 IQCA1LA6NCM1 817 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TBX3O15119 743 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ZBED4O75132 1171 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 NR1I2O75469 434 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms