RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
SREBF1-205ENST00000395757 GPSM2P81274 684 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 SPATA1Q5VX52 437 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 PSMA7O14818 248 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.191e-8■■■■■ 169.5
SREBF1-205ENST00000395757 USH1GQ495M9 461 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
SREBF1-205ENST00000395757 NELFCDQ8IXH7 590 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 ANKRD13CQ8N6S4 541 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 FAM207AQ9NSI2 230 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-205ENST00000395757 USP17L5A8MUK1 530 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 CABP7Q86V35 215 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 PHF20Q9BVI0 1012 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 EPS15P42566 896 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 GSTO1P78417 241 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 TBC1D8BQ0IIM8 1120 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 SF3B3Q15393 1217 aaKnown RBP16.21■□□□□ 0.19
SREBF1-205ENST00000395757 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 CALML4Q96GE6 196 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 B4DLN1 442 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 MYO1BO43795 1136 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 GYS2P54840 703 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 KRT222Q8N1A0 295 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 C6orf50Q9HD87 102 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
SREBF1-205ENST00000395757 PRCPP42785 496 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 CDK8P49336 464 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.18
SREBF1-205ENST00000395757 KRT31Q15323 416 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 ENOX1Q8TC92 643 aaKnown RBP16.21■□□□□ 0.18
SREBF1-205ENST00000395757 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 INTS13Q9NVM9 706 aa16.21■□□□□ 0.18
SREBF1-205ENST00000395757 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.18
SREBF1-205ENST00000395757 STK36Q9NRP7 1315 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 ZMYND10O75800 440 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 SHISA4Q96DD7 197 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
SREBF1-205ENST00000395757 JADE2Q9NQC1 790 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 DDAH1O94760 285 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 BMP15O95972 392 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 CYP27A1Q02318 531 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 SPICE1Q8N0Z3 855 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 USP40Q9NVE5 1235 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
SREBF1-205ENST00000395757 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
SREBF1-205ENST00000395757 PKD2L1Q9P0L9 805 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 TRIM10Q9UDY6 481 aa16.2■□□□□ 0.18
SREBF1-205ENST00000395757 LUC7L2Q9Y383 392 aaKnown RBP16.2■□□□□ 0.18
SREBF1-205ENST00000395757 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-205ENST00000395757 POTEMA6NI47 508 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 PLCG1P19174 1290 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 GNAQP50148 359 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 DMTNQ08495 405 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 NONOQ15233 471 aaKnown RBP eCLIP16.19■□□□□ 0.18
SREBF1-205ENST00000395757 FCHSD1Q86WN1 690 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-205ENST00000395757 DPYDQ12882 1025 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 PFKFB3Q16875 520 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-205ENST00000395757 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 CACNA2D4Q7Z3S7 1137 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
SREBF1-205ENST00000395757 ZNF76P36508 570 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
SREBF1-205ENST00000395757 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 REXO1Q8N1G1 1221 aaKnown RBP16.18■□□□□ 0.18
SREBF1-205ENST00000395757 TC2NQ8N9U0 490 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 NLRC4Q9NPP4 1024 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 PCDHA4Q9UN74 947 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 FCER1AP12319 257 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 CLCN6P51797 869 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 LRWD1Q9UFC0 647 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 GRAPQ13588 217 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 C12orf60Q5U649 245 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-205ENST00000395757 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
SREBF1-205ENST00000395757 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
SREBF1-205ENST00000395757 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■■■■ 103.1
SREBF1-205ENST00000395757 XDHP47989 1333 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-205ENST00000395757 TXNRD1Q16881 649 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 CCDC40Q4G0X9 1142 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 CHP1Q99653 195 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms