RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 MOXD2PA6NHM9 499 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 GRXCR1A8MXD5 290 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 COL9A1P20849 921 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 ADD2P35612 726 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 KCNA10Q16322 511 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 TMEM240Q5SV17 173 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 RASIP1Q5U651 963 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
SNCA-205ENST00000394991 BDP1A6H8Y1 2624 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 SYNGAP1Q96PV0 1343 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 USP17L12C9JPN9 530 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 USP17L21D6R901 530 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 ADCY6O43306 1168 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 COPB2P35606 906 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 MFSD5Q6N075 450 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNCA-205ENST00000394991 PBX4Q9BYU1 374 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
SNCA-205ENST00000394991 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 DNAJC25-GNG10A0A024R161 153 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 RAD21O60216 631 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 CST5P28325 142 aaPredicted RBP19.06■□□□□ 0.64
SNCA-205ENST00000394991 CDK7P50613 346 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 MAMDC4Q6UXC1 1216 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 MSL3Q8N5Y2 521 aaKnown RBP19.06■□□□□ 0.64
SNCA-205ENST00000394991 PPM1EQ8WY54 764 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 NUP88Q99567 741 aaPredicted RBP19.06■□□□□ 0.64
SNCA-205ENST00000394991 PRDM12Q9H4Q4 367 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 KANSL2Q9H9L4 492 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 GOPCQ9HD26 462 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 RAPGEFL1Q9UHV5 662 aa19.06■□□□□ 0.64
SNCA-205ENST00000394991 ZHX1Q9UKY1 873 aaPredicted RBP19.06■□□□□ 0.64
SNCA-205ENST00000394991 LRRC37A2A6NM11 1700 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 TCF20Q9UGU0 1960 aaKnown RBP19.05■□□□□ 0.64
SNCA-205ENST00000394991 APBB1O00213 710 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 DUSP11O75319 330 aaKnown RBP19.05■□□□□ 0.64
SNCA-205ENST00000394991 CSF2RAP15509 400 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 PPIGQ13427 754 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNCA-205ENST00000394991 SNRNP48Q6IEG0 339 aaKnown RBP19.05■□□□□ 0.64
SNCA-205ENST00000394991 FGD4Q96M96 766 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 GAS2L1Q99501 681 aaPredicted RBP19.05■□□□□ 0.64
SNCA-205ENST00000394991 TEX13BQ9BXU2 312 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
SNCA-205ENST00000394991 ELP1O95163 1332 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 ASGR1P07306 291 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 ACRP10323 421 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 ADGRE1Q14246 886 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 HSP90AB4PQ58FF6 505 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 AKNAD1Q5T1N1 836 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 CCDC129Q6ZRS4 1044 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
SNCA-205ENST00000394991 GLT1D1Q96MS3 346 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 SLF1Q9BQI6 1058 aa19.04■□□□□ 0.64
SNCA-205ENST00000394991 UPF3AQ9H1J1 476 aaKnown RBP19.04■□□□□ 0.64
SNCA-205ENST00000394991 MROH7Q68CQ1 1323 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 C6orf222P0C671 652 aaPredicted RBP19.03■□□□□ 0.64
SNCA-205ENST00000394991 ACVR2BQ13705 512 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 CTR9Q6PD62 1173 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 ZNF365Q70YC5 407 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 FAM126BQ8IXS8 530 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 AMOTL1Q8IY63 956 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 KIF1BPQ96EK5 621 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 DDX11Q96FC9 970 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 PPP1R12CQ9BZL4 782 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.03■□□□□ 0.64
SNCA-205ENST00000394991 THEGQ9P2T0 379 aa19.03■□□□□ 0.64
SNCA-205ENST00000394991 CHD7Q9P2D1 2997 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 ARVCFO00192 962 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 CTAGE5O15320 804 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 IFIT2P09913 472 aaKnown RBP19.02■□□□□ 0.64
SNCA-205ENST00000394991 GJA9P57773 515 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 ZNF467Q7Z7K2 595 aaPredicted RBP19.02■□□□□ 0.64
SNCA-205ENST00000394991 PANK1Q8TE04 598 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 ATXN2LQ8WWM7 1075 aaKnown RBP19.02■□□□□ 0.64
SNCA-205ENST00000394991 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 SLC4A4Q9Y6R1 1079 aa19.02■□□□□ 0.64
SNCA-205ENST00000394991 A0A0U1RQG5 324 aaPredicted RBP19.01■□□□□ 0.63
SNCA-205ENST00000394991 NDUFB10O96000 172 aa19.01■□□□□ 0.63
SNCA-205ENST00000394991 CCDC144BQ3MJ40 725 aa19.01■□□□□ 0.63
SNCA-205ENST00000394991 PSRC1Q6PGN9 363 aaPredicted RBP19.01■□□□□ 0.63
SNCA-205ENST00000394991 CCDC174Q6PII3 467 aa19.01■□□□□ 0.63
SNCA-205ENST00000394991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNCA-205ENST00000394991 TMEM199Q8N511 208 aa19.01■□□□□ 0.63
SNCA-205ENST00000394991 PCSK9Q8NBP7 692 aaKnown RBP19.01■□□□□ 0.63
SNCA-205ENST00000394991 ASB2Q96Q27 587 aa19.01■□□□□ 0.63
SNCA-205ENST00000394991 CXXC1Q9P0U4 656 aaPredicted RBP19.01■□□□□ 0.63
SNCA-205ENST00000394991 LCTP09848 1927 aa19■□□□□ 0.63
SNCA-205ENST00000394991 ATP2A1O14983 1001 aa19■□□□□ 0.63
SNCA-205ENST00000394991 RASA1P20936 1047 aa19■□□□□ 0.63
SNCA-205ENST00000394991 CYP2C18P33260 490 aa19■□□□□ 0.63
SNCA-205ENST00000394991 SLC4A3P48751 1232 aa19■□□□□ 0.63
SNCA-205ENST00000394991 UBE3CQ15386 1083 aa19■□□□□ 0.63
SNCA-205ENST00000394991 CPXCR1Q8N123 301 aa19■□□□□ 0.63
SNCA-205ENST00000394991 ADAMTS19Q8TE59 1207 aa19■□□□□ 0.63
SNCA-205ENST00000394991 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.63
SNCA-205ENST00000394991 KATNBL1Q9H079 304 aa19■□□□□ 0.63
SNCA-205ENST00000394991 PUS7LQ9H0K6 701 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms