RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SNRNP48Q6IEG0 339 aaKnown RBP25.32■■□□□ 1.64
TRAF4-203ENST00000394925 DDX11Q96FC9 970 aa25.32■■□□□ 1.64
TRAF4-203ENST00000394925 TEX13BQ9BXU2 312 aa25.32■■□□□ 1.64
TRAF4-203ENST00000394925 ACLYP53396 1101 aa25.31■■□□□ 1.64
TRAF4-203ENST00000394925 STRBPQ96SI9 672 aaKnown RBP25.31■■□□□ 1.64
TRAF4-203ENST00000394925 TSEN34Q9BSV6 310 aaKnown RBP25.31■■□□□ 1.64
TRAF4-203ENST00000394925 MKNK2Q9HBH9 465 aa25.31■■□□□ 1.64
TRAF4-203ENST00000394925 RIPK3Q9Y572 518 aa25.31■■□□□ 1.64
TRAF4-203ENST00000394925 GREB1LQ9C091 1923 aaPredicted RBP25.31■■□□□ 1.64
TRAF4-203ENST00000394925 F5H6K3 240 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 SMARCA5O60264 1052 aaPredicted RBP25.3■■□□□ 1.64
TRAF4-203ENST00000394925 RASA1P20936 1047 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 FPGSQ05932 587 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 KLRC3Q07444 240 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 MSL3Q8N5Y2 521 aaKnown RBP25.3■■□□□ 1.64
TRAF4-203ENST00000394925 LRRCC1Q9C099 1032 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 STARD7Q9NQZ5 370 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 NYAP2Q9P242 653 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 ZHX1Q9UKY1 873 aaPredicted RBP25.3■■□□□ 1.64
TRAF4-203ENST00000394925 FAM184BQ9ULE4 1060 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 SYNRGQ9UMZ2 1314 aa25.3■■□□□ 1.64
TRAF4-203ENST00000394925 MINDY4BA8MYZ0 360 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 SNAI1O95863 264 aaPredicted RBP25.29■■□□□ 1.64
TRAF4-203ENST00000394925 NDUFB10O96000 172 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 FOSL2P15408 326 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 FAAP100Q0VG06 881 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 SBK1Q52WX2 424 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 CPXCR1Q8N123 301 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 PRPF38AQ8NAV1 312 aaKnown RBP25.29■■□□□ 1.64
TRAF4-203ENST00000394925 NUP133Q8WUM0 1156 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 CHMP4BQ9H444 224 aaKnown RBP25.29■■□□□ 1.64
TRAF4-203ENST00000394925 SYNGAP1Q96PV0 1343 aa25.29■■□□□ 1.64
TRAF4-203ENST00000394925 GSG1L2A8MUP6 293 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 DCDC2CA8MYV0 355 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 KCNA10Q16322 511 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 ANKRD33Q7Z3H0 272 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 KLHDC9Q8NEP7 349 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 TOX2Q96NM4 488 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 CLIP2Q9UDT6 1046 aa25.28■■□□□ 1.64
TRAF4-203ENST00000394925 CTDP1Q9Y5B0 961 aaPredicted RBP25.28■■□□□ 1.64
TRAF4-203ENST00000394925 DNAJC25-GNG10A0A024R161 153 aa25.27■■□□□ 1.64
TRAF4-203ENST00000394925 MAMDC4Q6UXC1 1216 aa25.27■■□□□ 1.64
TRAF4-203ENST00000394925 MYH4Q9Y623 1939 aa25.27■■□□□ 1.64
TRAF4-203ENST00000394925 MCM3APO60318 1980 aa25.26■■□□□ 1.63
TRAF4-203ENST00000394925 MYADML2A6NDP7 307 aa25.26■■□□□ 1.63
TRAF4-203ENST00000394925 MOXD2PA6NHM9 499 aa25.26■■□□□ 1.63
TRAF4-203ENST00000394925 ZBED4O75132 1171 aa25.26■■□□□ 1.63
TRAF4-203ENST00000394925 KIFC2Q96AC6 838 aa25.26■■□□□ 1.63
TRAF4-203ENST00000394925 SPTBN5Q9NRC6 3674 aaKnown RBP25.25■■□□□ 1.63
TRAF4-203ENST00000394925 TMEM265A0A087WTH1 108 aa25.25■■□□□ 1.63
TRAF4-203ENST00000394925 DUSP11O75319 330 aaKnown RBP25.25■■□□□ 1.63
TRAF4-203ENST00000394925 IRX5P78411 483 aaPredicted RBP25.25■■□□□ 1.63
TRAF4-203ENST00000394925 CCSAPQ6IQ19 270 aaPredicted RBP25.25■■□□□ 1.63
TRAF4-203ENST00000394925 GIMAP6Q6P9H5 292 aa25.25■■□□□ 1.63
TRAF4-203ENST00000394925 OSBP2Q969R2 916 aa25.25■■□□□ 1.63
TRAF4-203ENST00000394925 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
TRAF4-203ENST00000394925 ECHDC1Q9NTX5 307 aa25.25■■□□□ 1.63
TRAF4-203ENST00000394925 ATP2A1O14983 1001 aa25.24■■□□□ 1.63
TRAF4-203ENST00000394925 C6orf222P0C671 652 aaPredicted RBP25.24■■□□□ 1.63
TRAF4-203ENST00000394925 ACVR2BQ13705 512 aa25.24■■□□□ 1.63
TRAF4-203ENST00000394925 ZNF467Q7Z7K2 595 aaPredicted RBP25.24■■□□□ 1.63
TRAF4-203ENST00000394925 ANKRD35Q8N283 1001 aa25.24■■□□□ 1.63
TRAF4-203ENST00000394925 GLT1D1Q96MS3 346 aa25.24■■□□□ 1.63
TRAF4-203ENST00000394925 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.24■■□□□ 1.63
TRAF4-203ENST00000394925 IGKV6D-41A0A0C4DH26 115 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-203ENST00000394925 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-203ENST00000394925 PRDM1O75626 825 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 TIMP1P01033 207 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 DNAJB2P25686 324 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 ZNF444Q8N0Y2 327 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-203ENST00000394925 KBTBD3Q8NAB2 608 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 APPBP2Q92624 585 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 VTI1AQ96AJ9 217 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 SLC38A10Q9HBR0 1119 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
TRAF4-203ENST00000394925 ADCY6O43306 1168 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 TDO2P48775 406 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 GRIN2CQ14957 1233 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 CCDC144BQ3MJ40 725 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 SPC25Q9HBM1 224 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 EPB41L4AQ9HCS5 686 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-203ENST00000394925 FEM1BQ9UK73 627 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 TBX21Q9UL17 535 aa25.22■■□□□ 1.63
TRAF4-203ENST00000394925 ELP1O95163 1332 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 GPAA1O43292 621 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 ASGR1P07306 291 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 CST5P28325 142 aaPredicted RBP25.21■■□□□ 1.63
TRAF4-203ENST00000394925 PCSK9Q8NBP7 692 aaKnown RBP25.21■■□□□ 1.63
TRAF4-203ENST00000394925 CEP95Q96GE4 821 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 FGD4Q96M96 766 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.21■■□□□ 1.634e-10■■■□□ 18.2
TRAF4-203ENST00000394925 ABHD16BQ9H3Z7 469 aa25.21■■□□□ 1.63
TRAF4-203ENST00000394925 MROH7Q68CQ1 1323 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 RNF113AO15541 343 aaKnown RBP25.2■■□□□ 1.62
TRAF4-203ENST00000394925 APPP05067 770 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 CDK7P50613 346 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 TSHZ3Q63HK5 1081 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 MFSD5Q6N075 450 aa25.2■■□□□ 1.62
TRAF4-203ENST00000394925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms