RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 DNAJC2Q99543 621 aaKnown RBP23.71■■□□□ 1.39
UPK3B-203ENST00000394849 TEX13BQ9BXU2 312 aa23.71■■□□□ 1.39
UPK3B-203ENST00000394849 ARMT1Q9H993 441 aa23.71■■□□□ 1.39
UPK3B-203ENST00000394849 SPC25Q9HBM1 224 aa23.71■■□□□ 1.39
UPK3B-203ENST00000394849 IL1RAPL2Q9NP60 686 aa23.71■■□□□ 1.39
UPK3B-203ENST00000394849 FBXO28Q9NVF7 368 aa23.71■■□□□ 1.39
UPK3B-203ENST00000394849 IFIT2P09913 472 aaKnown RBP23.7■■□□□ 1.38
UPK3B-203ENST00000394849 KCNA10Q16322 511 aa23.7■■□□□ 1.38
UPK3B-203ENST00000394849 CCSAPQ6IQ19 270 aaPredicted RBP23.7■■□□□ 1.38
UPK3B-203ENST00000394849 REPS2Q8NFH8 660 aa23.7■■□□□ 1.38
UPK3B-203ENST00000394849 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
UPK3B-203ENST00000394849 DDX11Q96FC9 970 aa23.7■■□□□ 1.38
UPK3B-203ENST00000394849 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.7■■□□□ 1.38
UPK3B-203ENST00000394849 MYO9BQ13459 2157 aa23.69■■□□□ 1.38
UPK3B-203ENST00000394849 MBD4O95243 580 aa23.69■■□□□ 1.38
UPK3B-203ENST00000394849 TMEM199Q8N511 208 aa23.69■■□□□ 1.38
UPK3B-203ENST00000394849 USP38Q8NB14 1042 aa23.69■■□□□ 1.38
UPK3B-203ENST00000394849 NCOR1O75376 2440 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 USP17L12C9JPN9 530 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 USP17L21D6R901 530 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 ADD2P35612 726 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 CDK7P50613 346 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 RASIP1Q5U651 963 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 PSRC1Q6PGN9 363 aaPredicted RBP23.68■■□□□ 1.38
UPK3B-203ENST00000394849 SLF1Q9BQI6 1058 aa23.68■■□□□ 1.38
UPK3B-203ENST00000394849 DNAJC25-GNG10A0A024R161 153 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 ATP2A1O14983 1001 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 PRKAB2O43741 272 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 SNAI1O95863 264 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-203ENST00000394849 RLBP1P12271 317 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 FAM83BQ5T0W9 1011 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 CCDC129Q6ZRS4 1044 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 LENG1Q96BZ8 264 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-203ENST00000394849 PAG1Q9NWQ8 432 aa23.67■■□□□ 1.38
UPK3B-203ENST00000394849 ZHX1Q9UKY1 873 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-203ENST00000394849 TLR3O15455 904 aaKnown RBP23.66■■□□□ 1.38
UPK3B-203ENST00000394849 RAD21O60216 631 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 COL9A1P20849 921 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 TMEM240Q5SV17 173 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 SNRNP48Q6IEG0 339 aaKnown RBP23.66■■□□□ 1.38
UPK3B-203ENST00000394849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.66■■□□□ 1.38
UPK3B-203ENST00000394849 PRPF38AQ8NAV1 312 aaKnown RBP23.66■■□□□ 1.38
UPK3B-203ENST00000394849 PBX4Q9BYU1 374 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 MTIF3Q9H2K0 278 aaKnown RBP23.66■■□□□ 1.38
UPK3B-203ENST00000394849 ABHD16BQ9H3Z7 469 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 THEGQ9P2T0 379 aa23.66■■□□□ 1.38
UPK3B-203ENST00000394849 A0A0U1RQG5 324 aaPredicted RBP23.65■■□□□ 1.38
UPK3B-203ENST00000394849 C6orf222P0C671 652 aaPredicted RBP23.65■■□□□ 1.38
UPK3B-203ENST00000394849 ACVR2BQ13705 512 aa23.65■■□□□ 1.38
UPK3B-203ENST00000394849 UBE3CQ15386 1083 aa23.65■■□□□ 1.38
UPK3B-203ENST00000394849 RAB30Q15771 203 aa23.65■■□□□ 1.38
UPK3B-203ENST00000394849 VTI1AQ96AJ9 217 aa23.65■■□□□ 1.38
UPK3B-203ENST00000394849 UPF3AQ9H1J1 476 aaKnown RBP23.65■■□□□ 1.38
UPK3B-203ENST00000394849 MSRAQ9UJ68 235 aa23.65■■□□□ 1.38
UPK3B-203ENST00000394849 ARVCFO00192 962 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 HMMRO75330 724 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 ASGR1P07306 291 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 GJA9P57773 515 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 ASB2Q96Q27 587 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.37
UPK3B-203ENST00000394849 FBXO40Q9UH90 709 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
UPK3B-203ENST00000394849 CHD9Q3L8U1 2897 aa23.64■■□□□ 1.37
UPK3B-203ENST00000394849 CYP2D7A0A087X1C5 515 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 ZBED4O75132 1171 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 RAB11FIP3O75154 756 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 ATP5JP18859 108 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 MRPS5P82675 430 aaKnown RBP23.63■■□□□ 1.37
UPK3B-203ENST00000394849 ZSCAN25Q6NSZ9 544 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 C16orf59Q7L2K0 433 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 SEZ6LQ9BYH1 1024 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.63■■□□□ 1.37
UPK3B-203ENST00000394849 NYAP2Q9P242 653 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 SLC4A4Q9Y6R1 1079 aa23.63■■□□□ 1.37
UPK3B-203ENST00000394849 CSF2RAP15509 400 aa23.62■■□□□ 1.37
UPK3B-203ENST00000394849 GNASQ5JWF2 1037 aa23.62■■□□□ 1.37
UPK3B-203ENST00000394849 CTR9Q6PD62 1173 aa23.62■■□□□ 1.37
UPK3B-203ENST00000394849 FAM126BQ8IXS8 530 aa23.62■■□□□ 1.37
UPK3B-203ENST00000394849 RPAP2Q8IXW5 612 aaPredicted RBP23.62■■□□□ 1.37
UPK3B-203ENST00000394849 MYH7P12883 1935 aa23.62■■□□□ 1.37
UPK3B-203ENST00000394849 F5H6K3 240 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 OAZ1P54368 228 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 NKX3-2P78367 333 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 KLRC3Q07444 240 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 CCDC144BQ3MJ40 725 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 ZNF365Q70YC5 407 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 CHST13Q8NET6 341 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 IL27Q8NEV9 243 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 HERVK_113Q902F9 699 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 HAUS7Q99871 368 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 PRDM12Q9H4Q4 367 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 IL23AQ9NPF7 189 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 RIPK3Q9Y572 518 aa23.61■■□□□ 1.37
UPK3B-203ENST00000394849 GREB1LQ9C091 1923 aaPredicted RBP23.61■■□□□ 1.37
UPK3B-203ENST00000394849 BDP1A6H8Y1 2624 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 MYADML2A6NDP7 307 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 MS4A1P11836 297 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 PBX2P40425 430 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 ANKRD35Q8N283 1001 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 PPM1EQ8WY54 764 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms