RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 SPTY2D1Q68D10 685 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 BIN2Q9UBW5 565 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 XDHP47989 1333 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 FAM237AA0A1B0GTK4 181 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 MPHOSPH10O00566 681 aaKnown RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 FANCGO15287 622 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 ABL1P00519 1130 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 ATP2C1P98194 919 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 LONRF2Q1L5Z9 754 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 TMEM139Q8IV31 216 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 ARPP21Q9UBL0 812 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 TCP11X2Q5H9J9 407 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 TTF2Q9UNY4 1162 aaKnown RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 SRGAP1Q7Z6B7 1085 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 SLC51AQ86UW1 340 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 RGS22Q8NE09 1264 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 TMEM60Q9H2L4 133 aa11.84□□□□□ -0.51
ACTN1-203ENST00000394419 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-203ENST00000394419 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 CABP7Q86V35 215 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 ANKRD2Q9GZV1 360 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 FRMPD2Q68DX3 1309 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 SMCO2A6NFE2 343 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 TNNI2P48788 182 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 GNAQP50148 359 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 SPA17Q15506 151 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 OR8K1Q8NGG5 319 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 TTC26A0AVF1 554 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 MRPS25P82663 173 aaKnown RBP11.83□□□□□ -0.52
ACTN1-203ENST00000394419 ARID5AQ03989 594 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 NYXQ9GZU5 481 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
ACTN1-203ENST00000394419 FAM205AQ6ZU69 1335 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 FAM170AA1A519 330 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 ST5P78524 1137 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 IKQ13123 557 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-203ENST00000394419 TDRD12Q587J7 1177 aaKnown RBP11.82□□□□□ -0.52
ACTN1-203ENST00000394419 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 PLEKHA4Q9H4M7 779 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 DISC1Q9NRI5 854 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-203ENST00000394419 AKR1B10O60218 316 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 CCDC42Q96M95 316 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 EYA3Q99504 573 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 ATRNO75882 1429 aa11.82□□□□□ -0.52
ACTN1-203ENST00000394419 RNF225M0QZC1 329 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 UFL1O94874 794 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 KRT18P05783 430 aaKnown RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 LONP1P36776 959 aaKnown RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 TUBGCP2Q9BSJ2 902 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 KCND1Q9NSA2 647 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 MYO6Q9UM54 1294 aa11.81□□□□□ -0.52
ACTN1-203ENST00000394419 MYO5AQ9Y4I1 1855 aaKnown RBP11.81□□□□□ -0.52
ACTN1-203ENST00000394419 H7C1D1 291 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms