RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 EYA3Q99504 573 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 COA1Q9GZY4 146 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
SMAD1-202ENST00000394092 MYH4Q9Y623 1939 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 ARHGAP6O43182 974 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 ZSCAN12O43309 604 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 GTPBP6O43824 516 aaPredicted RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 BMP6P22004 513 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 GNA11P29992 359 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 MCM7P33993 719 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 PRPHP41219 470 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 AFMP43652 599 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 CDK8P49336 464 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 SPAG1Q07617 926 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 FILIP1LQ4L180 1135 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 SPECC1LQ69YQ0 1117 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 USP49Q70CQ1 688 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 ANKRD20A12PQ8NF67 263 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 MYO3BQ8WXR4 1341 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 RRP36Q96EU6 259 aaKnown RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 TMEM47Q9BQJ4 181 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 TMX4Q9H1E5 349 aaPredicted RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 MAGEF1Q9HAY2 307 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 C6orf50Q9HD87 102 aa8.15□□□□□ -1.1
SMAD1-202ENST00000394092 SAP30BPQ9UHR5 308 aaKnown RBP8.15□□□□□ -1.1
SMAD1-202ENST00000394092 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 KLRF2D3W0D1 207 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 STXBP3O00186 592 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 FMR1Q06787 632 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 E2F4Q16254 413 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ZNF827Q17R98 1081 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 DTHD1Q6ZMT9 781 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 KRT27Q7Z3Y8 459 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GRAMD1CQ8IYS0 662 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 STAG2Q8N3U4 1231 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 RASSF8Q8NHQ8 419 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 PPP1R13BQ96KQ4 1090 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 AK8Q96MA6 479 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GPR101Q96P66 508 aaPredicted RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GTPBP4Q9BZE4 634 aaKnown RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 CUEDC2Q9H467 287 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GREB1LQ9C091 1923 aaPredicted RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 COL11A2P13942 1736 aaPredicted RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 A0A087X0B3 334 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ESYT2A0FGR8 921 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 USP27XA6NNY8 438 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 M0R2N6 131 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 STX10O60499 249 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 TPM1P09493 284 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 STAT6P42226 847 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 NAPAP54920 295 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 RHBDL3P58872 404 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 DDR1Q08345 913 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 CUL4BQ13620 913 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 NONOQ15233 471 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 GRIK5Q16478 980 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ASPRV1Q53RT3 343 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 E4F1Q66K89 784 aaPredicted RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 DPF2Q92785 391 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 CCDC47Q96A33 483 aaKnown RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 NAA15Q9BXJ9 866 aaKnown RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 DISC1Q9NRI5 854 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 TRMT1Q9NXH9 659 aaKnown RBP8.14□□□□□ -1.11
SMAD1-202ENST00000394092 POLLQ9UGP5 575 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 SWAP70Q9UH65 585 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 PCDHA6Q9UN73 950 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 ATP6V0A2Q9Y487 856 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 PCDHA8Q9Y5H6 950 aa8.14□□□□□ -1.11
SMAD1-202ENST00000394092 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
SMAD1-202ENST00000394092 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 PHLPP2Q6ZVD8 1323 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 WNT7AO00755 349 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 NPR1P16066 1061 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 ALDH1B1P30837 517 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 UBA7P41226 1012 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 PPP1R2P41236 205 aa8.13□□□□□ -1.11
SMAD1-202ENST00000394092 NOVP48745 357 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms