RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 SPP2Q13103 211 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
LAMB1-202ENST00000393559 CATIPQ7Z7H3 387 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 ANKS1AQ92625 1134 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 CEP95Q96GE4 821 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 MYL10Q9BUA6 226 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 KAT14Q9H8E8 782 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 STX8Q9UNK0 236 aa16.03■□□□□ 0.16
LAMB1-202ENST00000393559 IRF5Q13568 498 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 SHROOM1Q2M3G4 852 aaPredicted RBP16.02■□□□□ 0.16
LAMB1-202ENST00000393559 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 PXYLP1Q8TE99 480 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 NCOA5Q9HCD5 579 aaKnown RBP16.02■□□□□ 0.16
LAMB1-202ENST00000393559 PNMA3Q9UL41 463 aa16.02■□□□□ 0.16
LAMB1-202ENST00000393559 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.16
LAMB1-202ENST00000393559 DDAH1O94760 285 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 RCAN1P53805 252 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 NUP133Q8WUM0 1156 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 TMEM47Q9BQJ4 181 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 SMC3Q9UQE7 1217 aa16.01■□□□□ 0.15
LAMB1-202ENST00000393559 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
LAMB1-202ENST00000393559 NID2Q14112 1375 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 DTNBO60941 627 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 GH2P01242 217 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 TOP1P11387 765 aaKnown RBP16■□□□□ 0.15
LAMB1-202ENST00000393559 NOVP48745 357 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 HMGCS2P54868 508 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 JAG1P78504 1218 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 SEPT2Q15019 361 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 RTN1Q16799 776 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 PPP4R3BQ5MIZ7 849 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 ZNF280CQ8ND82 737 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 PNMA1Q8ND90 353 aa16■□□□□ 0.15
LAMB1-202ENST00000393559 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
LAMB1-202ENST00000393559 DHX16O60231 1041 aaKnown RBP15.99■□□□□ 0.15
LAMB1-202ENST00000393559 JAK2O60674 1132 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 TTLL1O95922 423 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 CALM1P0DP23 149 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 CALM2P0DP24 149 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 CALM3P0DP25 149 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 GUCY1A2P33402 732 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 TROAPQ12815 778 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
LAMB1-202ENST00000393559 NSUN7Q8NE18 718 aaKnown RBP15.99■□□□□ 0.15
LAMB1-202ENST00000393559 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
LAMB1-202ENST00000393559 KANSL2Q9H9L4 492 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
LAMB1-202ENST00000393559 CLIP2Q9UDT6 1046 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 ZBTB21Q9ULJ3 1066 aa15.99■□□□□ 0.15
LAMB1-202ENST00000393559 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 CPLX1O14810 134 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 CTDNEP1O95476 244 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 GJB2P29033 226 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 CDC27P30260 824 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 ADD1P35611 737 aaKnown RBP15.98■□□□□ 0.15
LAMB1-202ENST00000393559 DDIT3P35638 169 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 CAP2P40123 477 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 ICA1Q05084 483 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 PABPC4Q13310 644 aaKnown RBP eCLIP15.98■□□□□ 0.15
LAMB1-202ENST00000393559 RAB3GAP1Q15042 981 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 FAM110CQ1W6H9 321 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
LAMB1-202ENST00000393559 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.98■□□□□ 0.152e-15■■□□□ 12.1
LAMB1-202ENST00000393559 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 PAK6Q9NQU5 681 aaPredicted RBP15.98■□□□□ 0.15
LAMB1-202ENST00000393559 FAM217BQ9NTX9 383 aaPredicted RBP15.98■□□□□ 0.15
LAMB1-202ENST00000393559 LAMA3Q16787 3333 aa15.98■□□□□ 0.15
LAMB1-202ENST00000393559 USP17L5A8MUK1 530 aa15.97■□□□□ 0.15
LAMB1-202ENST00000393559 EEF2P13639 858 aaKnown RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 GCLCP48506 637 aaPredicted RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 CPLX2Q6PUV4 134 aaKnown RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 NECAB2Q7Z6G3 386 aa15.97■□□□□ 0.15
LAMB1-202ENST00000393559 CTCFLQ8NI51 663 aaPredicted RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
LAMB1-202ENST00000393559 DIS3LQ8TF46 1054 aaKnown RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 ASCC2Q9H1I8 757 aaPredicted RBP15.97■□□□□ 0.15
LAMB1-202ENST00000393559 NYAP2Q9P242 653 aa15.97■□□□□ 0.15
LAMB1-202ENST00000393559 MTMR7Q9Y216 660 aa15.97■□□□□ 0.15
LAMB1-202ENST00000393559 CCDC196A0A1B0GTZ2 297 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 PPFIA3O75145 1194 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 TRIM32Q13049 653 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 PPP2R5BQ15173 497 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 DDX11Q96FC9 970 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 CRISPLD2Q9H0B8 497 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.15
LAMB1-202ENST00000393559 CHMP5Q9NZZ3 219 aa15.96■□□□□ 0.15
LAMB1-202ENST00000393559 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
LAMB1-202ENST00000393559 CDKL5O76039 1030 aa15.95■□□□□ 0.14
LAMB1-202ENST00000393559 HMGCRP04035 888 aa15.95■□□□□ 0.14
LAMB1-202ENST00000393559 ASNSP08243 561 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms