RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ATN1P54259 1190 aaPredicted RBP21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 KCTD2Q14681 263 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 SNRNP48Q6IEG0 339 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 LRCH3Q96II8 777 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 TINF2Q9BSI4 451 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 TEX13BQ9BXU2 312 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 SLC38A10Q9HBR0 1119 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 SYNPO2Q9UMS6 1093 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 DIS3Q9Y2L1 958 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 KIFC2Q96AC6 838 aa21.7■■□□□ 1.06
PDLIM7-205ENST00000393551 FAM227BQ96M60 508 aa21.7■■□□□ 1.06
PDLIM7-205ENST00000393551 IL17RBQ9NRM6 502 aa21.7■■□□□ 1.06
PDLIM7-205ENST00000393551 MCM3APO60318 1980 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 DNAJC25-GNG10A0A024R161 153 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 A0A0D9SFI3 127 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 NMT2O60551 498 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 ZNF865P0CJ78 1059 aaPredicted RBP21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 COPB2P35606 906 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 SLFN13Q68D06 897 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 CPXCR1Q8N123 301 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 ARRDC4Q8NCT1 418 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 LNPKQ9C0E8 428 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 RAVER2Q9HCJ3 691 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 FEM1BQ9UK73 627 aa21.69■■□□□ 1.06
PDLIM7-205ENST00000393551 SLC3A2P08195 630 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 LRRC41Q15345 812 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 RASGRP2Q7LDG7 609 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 HELLSQ9NRZ9 838 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 NRBP1Q9UHY1 535 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 ANAPC4Q9UJX5 808 aa21.68■■□□□ 1.06
PDLIM7-205ENST00000393551 ZBED4O75132 1171 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 IGHDP01880 384 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 FGRP09769 529 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 BMP3P12645 472 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 RTP1P59025 263 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 MDM2Q00987 491 aaPredicted RBP21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 FGD4Q96M96 766 aa21.67■■□□□ 1.06
PDLIM7-205ENST00000393551 LTBP2Q14767 1821 aa21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 SNAI1O95863 264 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 NOVP48745 357 aa21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 ALX1Q15699 326 aa21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 SLC39A5Q6ZMH5 540 aa21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 ZNF589Q86UQ0 364 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 LENG1Q96BZ8 264 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-205ENST00000393551 ZNF536O15090 1300 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 TMEM232C9JQI7 657 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 KBTBD13C9JR72 458 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 FGAP02671 866 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 MYCNP04198 464 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 MCCP23508 829 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 ADCYAP1R1P41586 468 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 SNX17Q15036 470 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 MAMDC4Q6UXC1 1216 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 TDHQ8IZJ6 230 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 GMCL1Q96IK5 515 aa21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 UBE2OQ9C0C9 1292 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-205ENST00000393551 TSPY2A6NKD2 308 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 PGK1P00558 417 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 OAZ1P54368 228 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 NMIQ13287 307 aaPredicted RBP21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 AAMPQ13685 434 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 EXOC6Q8TAG9 804 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 FERMT2Q96AC1 680 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 DDX11Q96FC9 970 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 STX8Q9UNK0 236 aa21.64■■□□□ 1.05
PDLIM7-205ENST00000393551 ORC4O43929 436 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 HSPD1P10809 573 aaKnown RBP21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 RARBP10826 455 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 LRIT3Q3SXY7 679 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 KCTD1Q719H9 257 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 MSL3Q8N5Y2 521 aaKnown RBP21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 STAG1Q8WVM7 1258 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 ATP11BQ9Y2G3 1177 aa21.63■■□□□ 1.05
PDLIM7-205ENST00000393551 SYNGAP1Q96PV0 1343 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 ADCY6O43306 1168 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 RANBP6O60518 1105 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 ADAMTS4O75173 837 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 SLC1A4P43007 532 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 STAT2P52630 851 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 TRIM60Q495X7 471 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 ZNF467Q7Z7K2 595 aaPredicted RBP21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 TICAM2Q86XR7 235 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 PLEKHM2Q8IWE5 1019 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 CHST13Q8NET6 341 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 AGBL1Q96MI9 1066 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 PHF24Q9UPV7 400 aa21.62■■□□□ 1.05
PDLIM7-205ENST00000393551 PLA2G6O60733 806 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 AKR1A1P14550 325 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 SNAP25P60880 206 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 C1orf53Q5VUE5 145 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 RCSD1Q6JBY9 416 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 CHD1LQ86WJ1 897 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms