RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SPAG5Q96R06 1193 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SLF1Q9BQI6 1058 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SYNCQ9H7C4 482 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 RTEL1Q9NZ71 1219 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SERPINA10Q9UK55 444 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 C19orf81C9J6K1 198 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SNAP23O00161 211 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 SH2B2O14492 632 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-203ENST00000393287 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATXN3-203ENST00000393287 TSGA10Q9BZW7 698 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 ANTXR1Q9H6X2 564 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 PCDHB13Q9Y5F0 798 aa9.07□□□□□ -0.96
ATXN3-203ENST00000393287 PIK3C2AO00443 1686 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 MARCKSP29966 332 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 NOSTRINQ8IVI9 506 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 CCDC117Q8IWD4 279 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 NUP58Q9BVL2 599 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 HAUS2Q9NVX0 235 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 STK36Q9NRP7 1315 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 SLC26A4O43511 780 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 OR52Z1P0C646 297 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 KRT83P78385 493 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 SIRT2Q8IXJ6 389 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 RXRAP19793 462 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 CASQ1P31415 396 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 DNM1Q05193 864 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 SEPT2Q15019 361 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 DDX25Q9UHL0 483 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 ORC4O43929 436 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 TUBB4BP68371 445 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 ALCAMQ13740 583 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 SKAP1Q86WV1 359 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 FAM81BQ96LP2 452 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 OSBPL5Q9H0X9 879 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 XPOTO43592 962 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 GAP43P17677 238 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 RFX5P48382 616 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 KCNV1Q6PIU1 500 aa9.06□□□□□ -0.96
ATXN3-203ENST00000393287 LRRC47Q8N1G4 583 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 TRIM6Q9C030 488 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 NUCKS1Q9H1E3 243 aaKnown RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 ALDH8A1Q9H2A2 487 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-203ENST00000393287 PSMD14O00487 310 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 SOCS7O14512 581 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-203ENST00000393287 TXKP42681 527 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 CLUL1Q15846 466 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 PLA2G4DQ86XP0 818 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 EIF3JO75822 258 aaKnown RBP9.05□□□□□ -0.96
ATXN3-203ENST00000393287 PAFAH1B1P43034 410 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 SREBF2Q12772 1141 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 MAP9Q49MG5 647 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 DYNLL1P63167 89 aaKnown RBP9.05□□□□□ -0.96
ATXN3-203ENST00000393287 CXCL9Q07325 125 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 COA7Q96BR5 231 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 NOX5Q96PH1 765 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 STRBPQ96SI9 672 aaKnown RBP9.05□□□□□ -0.96
ATXN3-203ENST00000393287 PCDHA1Q9Y5I3 950 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 CETN3O15182 167 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 DEPTORQ8TB45 409 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 FAM167AQ96KS9 214 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-203ENST00000393287 NDC80O14777 642 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 TRPC3Q13507 836 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 TRIML1Q8N9V2 468 aa9.05□□□□□ -0.96
ATXN3-203ENST00000393287 CCDC169A6NNP5 214 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 TAF12Q16514 161 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 PROM2Q8N271 834 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 MB21D1Q8N884 522 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 ADARB2Q9NS39 739 aaKnown RBP9.04□□□□□ -0.96
ATXN3-203ENST00000393287 CHMP2AO43633 222 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 JAK3P52333 1124 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 UBASH3AP57075 661 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 DPF2Q92785 391 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 GLG1Q92896 1179 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 HOMER2Q9NSB8 354 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 GNAT1P11488 350 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 PTH1RQ03431 593 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 GPC2Q8N158 579 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 LPAR1Q92633 364 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 PUF60Q9UHX1 559 aaKnown RBP9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L15C9J2P7 530 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L13C9JLJ4 530 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L11C9JVI0 530 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L18D6R9N7 530 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L22D6RA61 530 aa9.04□□□□□ -0.96
ATXN3-203ENST00000393287 USP17L17D6RBQ6 530 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms