RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 HINFPQ9BQA5 517 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 KLRC4O43908 158 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TTMPQ5BVD1 217 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 VPS16Q9H269 839 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 TRDNQ13061 729 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
PDCD4-202ENST00000393104 CWC15Q9P013 229 aaKnown RBP12.87□□□□□ -0.35
PDCD4-202ENST00000393104 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
PDCD4-202ENST00000393104 RWDD2AQ9UIY3 292 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 PRCPP42785 496 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
PDCD4-202ENST00000393104 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
PDCD4-202ENST00000393104 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SALL4Q9UJQ4 1053 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
PDCD4-202ENST00000393104 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
PDCD4-202ENST00000393104 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 DEXIO95424 95 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 PPARAQ07869 468 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 TAF1P21675 1872 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
PDCD4-202ENST00000393104 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
PDCD4-202ENST00000393104 KRT9P35527 623 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
PDCD4-202ENST00000393104 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
PDCD4-202ENST00000393104 CAPN11Q9UMQ6 739 aa12.85□□□□□ -0.35
PDCD4-202ENST00000393104 KCNJ18B7U540 433 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 PDE8BO95263 885 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 ITGA6P23229 1130 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 KCNJ12Q14500 433 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 MIIPQ5JXC2 388 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 LEKR1Q6ZMV7 388 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 ARL8AQ96BM9 186 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 GUCA1BQ9UMX6 200 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 LOC102724159A0A0B4J2E5 919 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 MBD4O95243 580 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 TUBB4BP68371 445 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 MRPS25P82663 173 aaKnown RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 PWP2Q15269 919 aaKnown RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 AFAP1L1Q8TED9 768 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 LAMB1P07942 1786 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 M0R2N6 131 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 KCNQ2O43526 872 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 PLEKP08567 350 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 RTN1Q16799 776 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
PDCD4-202ENST00000393104 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-202ENST00000393104 EPHB6O15197 1021 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 TROAPQ12815 778 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
PDCD4-202ENST00000393104 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 ADSSL1Q8N142 457 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
PDCD4-202ENST00000393104 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 SMARCAL1Q9NZC9 954 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 CAPN6Q9Y6Q1 641 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 ERLIN1O75477 346 aa12.83□□□□□ -0.36
PDCD4-202ENST00000393104 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms