RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SPICE1Q8N0Z3 855 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
SCN3B-202ENST00000392770 COA1Q9GZY4 146 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 USP17L3A6NCW0 530 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 USP17L4A6NCW7 530 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 SPECC1LQ69YQ0 1117 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 USP17L1Q7RTZ2 530 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 PIGSQ96S52 555 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 PANK4Q9NVE7 773 aa18.45■□□□□ 0.54
SCN3B-202ENST00000392770 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
SCN3B-202ENST00000392770 GSTA5Q7RTV2 222 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 GPHNQ9NQX3 736 aaPredicted RBP18.44■□□□□ 0.54
SCN3B-202ENST00000392770 FER1L4A9Z1Z3 1794 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 EXOC3O60645 756 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 MCM6Q14566 821 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
SCN3B-202ENST00000392770 RESTQ13127 1097 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 TMTC1Q8IUR5 882 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 STAG1Q8WVM7 1258 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
SCN3B-202ENST00000392770 KRT9P35527 623 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 SLC16A2P36021 539 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 TMEM87AQ8NBN3 555 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 SERPINB13Q9UIV8 391 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 APBB1IPQ7Z5R6 666 aaPredicted RBP18.44■□□□□ 0.54
SCN3B-202ENST00000392770 MCF2L2Q86YR7 1114 aa18.44■□□□□ 0.54
SCN3B-202ENST00000392770 KRT222Q8N1A0 295 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 TERF1P54274 439 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 ARHGAP6O43182 974 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 LIFRP42702 1097 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 ADKP55263 362 aaKnown RBP18.43■□□□□ 0.54
SCN3B-202ENST00000392770 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 MSANTD4Q8NCY6 345 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 FLOT1O75955 427 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 IFNAR1P17181 557 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 TRAPPC10P48553 1259 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 CDK8P49336 464 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 CCDC93Q567U6 631 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 SORBS3O60504 671 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 TUBB4BP68371 445 aa18.43■□□□□ 0.54
SCN3B-202ENST00000392770 RAD17O75943 681 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 NR5A1Q13285 461 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 SLC9C1Q4G0N8 1177 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 GAS2L3Q86XJ1 694 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 PGBD1Q96JS3 809 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 LAD1O00515 517 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 PLA2G4DQ86XP0 818 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
SCN3B-202ENST00000392770 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 GNA14O95837 355 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 CYB5R4Q7L1T6 521 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
SCN3B-202ENST00000392770 TEKT3Q9BXF9 490 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
SCN3B-202ENST00000392770 FAM102BQ5T8I3 360 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 CC2D2BQ6DHV5 1058 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 LINC00301Q8NCQ3 95 aa18.42■□□□□ 0.54
SCN3B-202ENST00000392770 OTUD6AQ7L8S5 288 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 SECISBP2LQ93073 1101 aaKnown RBP18.41■□□□□ 0.54
SCN3B-202ENST00000392770 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 CYP2D6P10635 497 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 CDAN1Q8IWY9 1227 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 DCPSQ96C86 337 aaKnown RBP18.41■□□□□ 0.54
SCN3B-202ENST00000392770 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
SCN3B-202ENST00000392770 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 IFT81Q8WYA0 676 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 PRDX5P30044 214 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 KANSL2Q9H9L4 492 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 FAM207AQ9NSI2 230 aaPredicted RBP18.41■□□□□ 0.54
SCN3B-202ENST00000392770 FANCLQ9NW38 375 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.54
SCN3B-202ENST00000392770 SFMBT2Q5VUG0 894 aa18.41■□□□□ 0.54
SCN3B-202ENST00000392770 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 ADRA2BP18089 450 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 TRPC3Q13507 836 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 SEL1L2Q5TEA6 688 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 DDX12PQ92771 950 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 LSM14BQ9BX40 385 aaKnown RBP18.4■□□□□ 0.54
SCN3B-202ENST00000392770 TNNC1P63316 161 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 GNPTABQ3T906 1256 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 PKNOX2Q96KN3 472 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 SLF1Q9BQI6 1058 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 PLEKHA8P1O95397 391 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 EVCP57679 992 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
SCN3B-202ENST00000392770 JCADQ9P266 1359 aa18.39■□□□□ 0.54
SCN3B-202ENST00000392770 COA7Q96BR5 231 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms