RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 DDX4Q9NQI0 724 aaKnown RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 TCP11L1Q9NUJ3 509 aa20.84■□□□□ 0.93
TRAF3-203ENST00000392745 ARHGAP6O43182 974 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 GNG11P61952 73 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
TRAF3-203ENST00000392745 PICALMQ13492 652 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 TEX35Q5T0J7 233 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 NOSTRINQ8IVI9 506 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 OXER1Q8TDS5 423 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 CCDC34Q96HJ3 373 aa20.83■□□□□ 0.93
TRAF3-203ENST00000392745 OAS2P29728 719 aaKnown RBP20.83■□□□□ 0.92
TRAF3-203ENST00000392745 BAG6P46379 1132 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 NT5C2P49902 561 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 NR5A1Q13285 461 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 PTPAQ15257 358 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 FCHSD1Q86WN1 690 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 SMARCE1Q969G3 411 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 KAT14Q9H8E8 782 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 VPS54Q9P1Q0 977 aa20.83■□□□□ 0.92
TRAF3-203ENST00000392745 CNTNAP5Q8WYK1 1306 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 VGLL3A8MV65 326 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 CDK11BP21127 795 aaKnown RBP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 BMP6P22004 513 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 CASQ1P31415 396 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 MAP3K9P80192 1104 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 LONRF3Q496Y0 759 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 FBXO41Q8TF61 875 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 ECE2O60344 883 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 TPM1P09493 284 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 TOB1P50616 345 aaPredicted RBP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 SF3B2Q13435 895 aaKnown RBP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 SAFBQ15424 915 aaKnown RBP eCLIP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 TOGARAM2Q6ZUX3 1019 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 PDILTQ8N807 584 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 FOXP1Q9H334 677 aaPredicted RBP20.82■□□□□ 0.92
TRAF3-203ENST00000392745 USP40Q9NVE5 1235 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
TRAF3-203ENST00000392745 FOXN1O15353 648 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 BAG1Q99933 345 aaPredicted RBP20.81■□□□□ 0.92
TRAF3-203ENST00000392745 PCDHA5Q9Y5H7 936 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 ATP8B1O43520 1251 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 VEGFAP15692 232 aaPredicted RBP20.81■□□□□ 0.92
TRAF3-203ENST00000392745 PPP2R3AQ06190 1150 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 AOC3Q16853 763 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 CDC42EP5Q6NZY7 148 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 ZNF287Q9HBT7 754 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 PCDHAC2Q9Y5I4 1007 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 MRFAP1Q9Y605 127 aa20.81■□□□□ 0.92
TRAF3-203ENST00000392745 PPP6R2O75170 966 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 ADKP55263 362 aaKnown RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 RESP18Q5W5W9 173 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 GPR161Q8N6U8 529 aaKnown RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 C21orf2O43822 256 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 TBX2Q13207 712 aaPredicted RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 SMC1AQ14683 1233 aaKnown RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 DACT2Q5SW24 774 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 STRIP1Q5VSL9 837 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 KIAA0825Q8IV33 1275 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 TEKT1Q969V4 418 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 PHF20Q9BVI0 1012 aa20.8■□□□□ 0.92
TRAF3-203ENST00000392745 ZNF646O15015 1829 aaPredicted RBP20.8■□□□□ 0.92
TRAF3-203ENST00000392745 CRKP46108 304 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 CNNM3Q8NE01 707 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 NEDD1Q8NHV4 660 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 PARD6BQ9BYG5 372 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 CCDC178Q5BJE1 867 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 KRBA2Q6ZNG9 492 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 TC2NQ8N9U0 490 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 KIFC2Q96AC6 838 aa20.79■□□□□ 0.92
TRAF3-203ENST00000392745 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 JMYQ8N9B5 988 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 DESI2Q9BSY9 194 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 MAD2L2Q9UI95 211 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 FAM237AA0A1B0GTK4 181 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 KIF5BP33176 963 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 GYS2P54840 703 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 GABPAQ06546 454 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 DHX58Q96C10 678 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 KCNH3Q9ULD8 1083 aa20.78■□□□□ 0.92
TRAF3-203ENST00000392745 XBP1P17861 261 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 NFIAQ12857 509 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 GRM4Q14833 912 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 NPY5RQ15761 445 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 TXLNBQ8N3L3 684 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 FUT8Q9BYC5 575 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 ARFGAP3Q9NP61 516 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 MTMR7Q9Y216 660 aa20.77■□□□□ 0.92
TRAF3-203ENST00000392745 STX10O60499 249 aa20.77■□□□□ 0.91
TRAF3-203ENST00000392745 KARSQ15046 597 aaKnown RBP20.77■□□□□ 0.91
TRAF3-203ENST00000392745 SLC35G1Q2M3R5 365 aa20.77■□□□□ 0.91
TRAF3-203ENST00000392745 EARS2Q5JPH6 523 aaKnown RBP20.77■□□□□ 0.91
TRAF3-203ENST00000392745 CABP5Q9NP86 173 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms