RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZNF202O95125 648 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 PRELPP51888 382 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 NAPAP54920 295 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 DPF2Q92785 391 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 CLIC6Q96NY7 704 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 ATP2B1P20020 1258 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
SMARCAL1-203ENST00000392128 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 GH2P01242 217 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 GNA11P29992 359 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 SYKP43405 635 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 MTMR8Q96EF0 704 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 C6orf50Q9HD87 102 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 WNT7AO00755 349 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 TNNI2P48788 182 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 JAG1P78504 1218 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 PPP1R18Q6NYC8 613 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 FERMT2Q96AC1 680 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 TMEM39BQ9GZU3 492 aa13.09□□□□□ -0.31
SMARCAL1-203ENST00000392128 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 SLC1A4P43007 532 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 CAVIN2O95810 425 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 ZNF174Q15697 407 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
SMARCAL1-203ENST00000392128 F5H6K3 240 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 GRIN1Q05586 938 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 KLRC3Q07444 240 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 KRT25Q7Z3Z0 450 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 ATAD5Q96QE3 1844 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 SBF1O95248 1867 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 ZBTB5O15062 677 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 PTGDRQ13258 359 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
SMARCAL1-203ENST00000392128 NDUFB10O96000 172 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 EGFRP00533 1210 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 SLC16A2P36021 539 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 STX1AQ16623 288 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 CSRNP2Q9H175 543 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
SMARCAL1-203ENST00000392128 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 RASA3Q14644 834 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 REXO1Q8N1G1 1221 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 PDLIM2Q96JY6 352 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 RAD21O60216 631 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 MCM7P33993 719 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 CAP2P40123 477 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 ADCY7P51828 1080 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 NONOQ15233 471 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 INF2Q27J81 1249 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 KRBA2Q6ZNG9 492 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms