RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 IQUBQ8NA54 791 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 CCDC148Q8NFR7 591 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 ESR2Q92731 530 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 PCMTD1Q96MG8 357 aaPredicted RBP20.24■□□□□ 0.83
ERCC2-201ENST00000391941 PIP4K2BP78356 416 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 TROAPQ12815 778 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 JADE2Q9NQC1 790 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 SEMA3EO15041 775 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 FECHP22830 423 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 ATP2B2Q01814 1243 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 SLC20A2Q08357 652 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 TRAPPC11Q7Z392 1133 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 TNFRSF25Q93038 417 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
ERCC2-201ENST00000391941 MYH2Q9UKX2 1941 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 ITIH6Q6UXX5 1313 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 MROH5Q6ZUA9 1318 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 USP17L21D6R901 530 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 ANKRD13CQ8N6S4 541 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 JAKMIP2Q96AA8 810 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 HPCAL4Q9UM19 191 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 XBP1P17861 261 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 STAT6P42226 847 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 USP14P54578 494 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 ATP2C1P98194 919 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-201ENST00000391941 RWDD2AQ9UIY3 292 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 SAR1BQ9Y6B6 198 aa20.23■□□□□ 0.83
ERCC2-201ENST00000391941 CYP19A1P11511 503 aaPredicted RBP20.22■□□□□ 0.83
ERCC2-201ENST00000391941 GNAT2P19087 354 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 TUBB2AQ13885 445 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 FERMT2Q96AC1 680 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 TUBB2BQ9BVA1 445 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 TMEM60Q9H2L4 133 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
ERCC2-201ENST00000391941 LUC7L2Q9Y383 392 aaKnown RBP20.22■□□□□ 0.83
ERCC2-201ENST00000391941 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 MB21D1Q8N884 522 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 FAM71BQ8TC56 605 aa20.22■□□□□ 0.83
ERCC2-201ENST00000391941 KLRK1P26718 216 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 TYW1BQ6NUM6 668 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 TSPYL1Q9H0U9 437 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
ERCC2-201ENST00000391941 CHRNDQ07001 517 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 OR8K1Q8NGG5 319 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 CHD4Q14839 1912 aa20.21■□□□□ 0.83
ERCC2-201ENST00000391941 TRIM21P19474 475 aaKnown RBP20.2■□□□□ 0.83
ERCC2-201ENST00000391941 RCAN1P53805 252 aa20.2■□□□□ 0.83
ERCC2-201ENST00000391941 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.83
ERCC2-201ENST00000391941 TIAM2Q8IVF5 1701 aa20.2■□□□□ 0.83
ERCC2-201ENST00000391941 AFAP1L1Q8TED9 768 aa20.2■□□□□ 0.83
ERCC2-201ENST00000391941 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
ERCC2-201ENST00000391941 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 AGPSO00116 658 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 PRPF3O43395 683 aaKnown RBP20.2■□□□□ 0.82
ERCC2-201ENST00000391941 NAALADL2Q58DX5 795 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 COG1Q8WTW3 980 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 CNTNAP5Q8WYK1 1306 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 SLIT2O94813 1529 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 PRPF6O94906 941 aaKnown RBP20.2■□□□□ 0.82
ERCC2-201ENST00000391941 IDEP14735 1019 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 STAG2Q8N3U4 1231 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 SELENOOQ9BVL4 669 aa20.2■□□□□ 0.82
ERCC2-201ENST00000391941 NCK2O43639 380 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-201ENST00000391941 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
ERCC2-201ENST00000391941 STIM1Q13586 685 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 KAT14Q9H8E8 782 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 LRWD1Q9UFC0 647 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 DMGDHQ9UI17 866 aaKnown RBP20.19■□□□□ 0.82
ERCC2-201ENST00000391941 MYH6P13533 1939 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
ERCC2-201ENST00000391941 COL5A2P05997 1499 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-201ENST00000391941 ZNF263O14978 683 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 FCER1AP12319 257 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 MTA3Q9BTC8 594 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 COL4A1P02462 1669 aa20.19■□□□□ 0.82
ERCC2-201ENST00000391941 RTL9Q8NET4 1388 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 FAM170AA1A519 330 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 EPHB6O15197 1021 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 ANKRD20A12PQ8NF67 263 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-201ENST00000391941 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 CAPN6Q9Y6Q1 641 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 CCT5P48643 541 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 TUBB4BP68371 445 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms