RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 EVA1CP58658 441 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 NLRP12P59046 1061 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 EXOSC9Q06265 439 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 HYAL2Q12891 473 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MTA1Q13330 715 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 DCTN1Q14203 1278 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 SYCP1Q15431 976 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 TRIP4Q15650 581 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 CHRNA2Q15822 529 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MTHFSDQ2M296 383 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 TTC31Q49AM3 519 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 AMOTQ4VCS5 1084 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 PLEKHO1Q53GL0 409 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 AKAP4Q5JQC9 854 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 COL13A1Q5TAT6 717 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 TTC39BQ5VTQ0 682 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 RNF43Q68DV7 783 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 INTS5Q6P9B9 1019 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 Q6ZS46 218 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 BEND4Q6ZU67 534 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 TOM1L2Q6ZVM7 507 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 SND1Q7KZF4 910 aaKnown RBP eCLIP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 ARMCX6Q7L4S7 300 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MCM10Q7L590 875 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MSL3Q8N5Y2 521 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 ANKRD20A12PQ8NF67 263 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 SLC7A3Q8WY07 619 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 RAPGEF4Q8WZA2 1011 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 ERCC4Q92889 916 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 CHMP4CQ96CF2 233 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 THUMPD2Q9BTF0 503 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MKNK1Q9BUB5 465 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 MUC3BQ9H195 1237 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 TMX4Q9H1E5 349 aaPredicted RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 NLRP2Q9NX02 1062 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 SUFUQ9UMX1 484 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 ANGEL1Q9UNK9 670 aaKnown RBP3.09□□□□□ -1.91
TRAV41-201ENST00000390468 PAXBP1Q9Y5B6 917 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 WDR17Q8IZU2 1322 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 A0A1B0GUL6 1792 aa3.09□□□□□ -1.91
TRAV41-201ENST00000390468 CRB1P82279 1406 aa3.09□□□□□ -1.92
TRAV41-201ENST00000390468 GLI3P10071 1580 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 THSD7AQ9UPZ6 1657 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 C4AP0C0L4 1744 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 C4BP0C0L5 1744 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 DDX60Q8IY21 1712 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 CCDC88AQ3V6T2 1871 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 MYO5AQ9Y4I1 1855 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 KLHL33A6NCF5 533 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ERICH4A6NGS2 130 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 PRR19A6NJB7 356 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TMEM88BA6NKF7 163 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 FSCN2O14926 492 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 PLIN1O60240 522 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 PRMT3O60678 531 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 BCAR3O75815 825 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 REC8O95072 547 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 EGFRP00533 1210 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TNNT1P13805 278 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ERCC3P19447 782 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 EPHA1P21709 976 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 HOXA10P31260 410 aaPredicted RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 MAP2K2P36507 400 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 IRX1P78414 480 aaPredicted RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 RAD51AP2Q09MP3 1159 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TEFQ10587 303 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 BIRC2Q13490 618 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ELOAQ14241 798 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TERF2Q15554 542 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ZRSR1Q15695 479 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ATP2B3Q16720 1220 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TWISTNBQ3B726 338 aaPredicted RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 COX20Q5RI15 118 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 AP1ARQ63HQ0 302 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 FDX2Q6P4F2 183 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF530Q6P9A1 599 aaPredicted RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ADAMTSL4Q6UY14 1074 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ANKRD23Q86SG2 305 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 NCAPG2Q86XI2 1143 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 HSCBQ8IWL3 235 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 FAM20CQ8IXL6 584 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ETFBKMTQ8IXQ9 262 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 EXOC8Q8IYI6 725 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ABI1Q8IZP0 508 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TMTC2Q8N394 836 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TBC1D22AQ8WUA7 517 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF428Q96B54 188 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 SGSM3Q96HU1 749 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 MYRFLQ96LU7 910 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 NOL10Q9BSC4 688 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 CXorf56Q9H5V9 222 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TSPYL4Q9UJ04 414 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 SPG7Q9UQ90 795 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 DDX49Q9Y6V7 483 aaKnown RBP3.08□□□□□ -1.92
TRAV41-201ENST00000390468 RREB1Q92766 1687 aa3.08□□□□□ -1.92
TRAV41-201ENST00000390468 TAF1P21675 1872 aa3.07□□□□□ -1.92
TRAV41-201ENST00000390468 UBR3Q6ZT12 1888 aa3.07□□□□□ -1.92
TRAV41-201ENST00000390468 FAM196BA6NMK8 535 aa3.07□□□□□ -1.92
TRAV41-201ENST00000390468 HMGB1P1B2RPK0 211 aaPredicted RBP3.07□□□□□ -1.92
TRAV41-201ENST00000390468 PES1O00541 588 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms