RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 PGK2P07205 417 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 EEF2P13639 858 aaKnown RBP8.47□□□□□ -1.05
TRAV27-201ENST00000390457 PLS1Q14651 629 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 CCSAPQ6IQ19 270 aaPredicted RBP8.47□□□□□ -1.05
TRAV27-201ENST00000390457 ANKRD33Q7Z3H0 272 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 CLASRPQ8N2M8 674 aaKnown RBP8.47□□□□□ -1.05
TRAV27-201ENST00000390457 KLHDC9Q8NEP7 349 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 MAFAQ8NHW3 353 aaPredicted RBP8.47□□□□□ -1.05
TRAV27-201ENST00000390457 PANK1Q8TE04 598 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 MYLIPQ8WY64 445 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 TOX2Q96NM4 488 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 XPNPEP3Q9NQH7 507 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 PPP1R9AQ9ULJ8 1098 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 PLXNA1Q9UIW2 1896 aa8.47□□□□□ -1.05
TRAV27-201ENST00000390457 DNAJC25-GNG10A0A024R161 153 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 SNAI1O95863 264 aaPredicted RBP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 PGK1P00558 417 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 CLTBP09497 229 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 RARBP10826 455 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 ATP5JP18859 108 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 STAT3P40763 770 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 FAAP100Q0VG06 881 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 UBE3CQ15386 1083 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 CTR9Q6PD62 1173 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 MMP19Q99542 508 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 HAUS7Q99871 368 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 TSEN34Q9BSV6 310 aaKnown RBP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 SH2D4AQ9H788 454 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 KANSL2Q9H9L4 492 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 PRDM5Q9NQX1 630 aaPredicted RBP8.46□□□□□ -1.06
TRAV27-201ENST00000390457 ZBTB40Q9NUA8 1239 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 PAG1Q9NWQ8 432 aa8.46□□□□□ -1.06
TRAV27-201ENST00000390457 A0A1W2PQ45 241 aaPredicted RBP8.45□□□□□ -1.06
TRAV27-201ENST00000390457 A0A1W2PQY0 241 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 ATP2A1O14983 1001 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 CDK7P50613 346 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 RNF180Q86T96 592 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
TRAV27-201ENST00000390457 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
TRAV27-201ENST00000390457 FGD4Q96M96 766 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
TRAV27-201ENST00000390457 BOLA2Q9H3K6 86 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 TBX21Q9UL17 535 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 RIPK3Q9Y572 518 aa8.45□□□□□ -1.06
TRAV27-201ENST00000390457 IGKV6D-41A0A0C4DH26 115 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 RAB11FIP3O75154 756 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 IFIT2P09913 472 aaKnown RBP8.44□□□□□ -1.06
TRAV27-201ENST00000390457 AKR1A1P14550 325 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 RASA1P20936 1047 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 CST5P28325 142 aaPredicted RBP8.44□□□□□ -1.06
TRAV27-201ENST00000390457 COPB2P35606 906 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 ACLYP53396 1101 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
TRAV27-201ENST00000390457 KCTD2Q14681 263 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 SBK1Q52WX2 424 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 FAM83BQ5T0W9 1011 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 NYAP2Q9P242 653 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 SYNGAP1Q96PV0 1343 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 SYNRGQ9UMZ2 1314 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 MYH7P12883 1935 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 MCM3APO60318 1980 aa8.44□□□□□ -1.06
TRAV27-201ENST00000390457 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 MYADML2A6NDP7 307 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 GSG1L2A8MUP6 293 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 F5H6K3 240 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 APBB1O00213 710 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 CTAGE5O15320 804 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 ADCY6O43306 1168 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 PQBP1O60828 265 aaKnown RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 DUSP11O75319 330 aaKnown RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 TIMP1P01033 207 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 RAG1P15918 1043 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 NKX3-2P78367 333 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 FPGSQ05932 587 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 KLRC3Q07444 240 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 KCNA10Q16322 511 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 TMEM240Q5SV17 173 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 USP38Q8NB14 1042 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 MKL1Q969V6 931 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 STRBPQ96SI9 672 aaKnown RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 TEX13BQ9BXU2 312 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 KATNBL1Q9H079 304 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 UPF3AQ9H1J1 476 aaKnown RBP8.43□□□□□ -1.06
TRAV27-201ENST00000390457 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
TRAV27-201ENST00000390457 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms