RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 FGD4Q96M96 766 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 PDLIM7Q9NR12 457 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
TRAV3-201ENST00000390425 PATL2C9JE40 543 aaKnown RBP13.17□□□□□ -0.3
TRAV3-201ENST00000390425 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 PGK1P00558 417 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
TRAV3-201ENST00000390425 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 MKL1Q969V6 931 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
TRAV3-201ENST00000390425 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 ERC2O15083 957 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 APPP05067 770 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 RARBP10826 455 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 MX1P20591 662 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 PPARAQ07869 468 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAV3-201ENST00000390425 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
TRAV3-201ENST00000390425 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 ADCY6O43306 1168 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 TTLL1O95922 423 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 AKR1A1P14550 325 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 ITGB8P26012 769 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
TRAV3-201ENST00000390425 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
TRAV3-201ENST00000390425 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
TRAV3-201ENST00000390425 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 A0A1W2PQ45 241 aaPredicted RBP13.14□□□□□ -0.31
TRAV3-201ENST00000390425 A0A1W2PQY0 241 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
TRAV3-201ENST00000390425 TLE2Q04725 743 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
TRAV3-201ENST00000390425 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
TRAV3-201ENST00000390425 BADQ92934 168 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
TRAV3-201ENST00000390425 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 NAPBQ9H115 298 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
TRAV3-201ENST00000390425 ZNF536O15090 1300 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 ZBED4O75132 1171 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 BMP3P12645 472 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 OAZ1P54368 228 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 TFAP4Q01664 338 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 PDE4BQ07343 736 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 SHHQ15465 462 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 CCSAPQ6IQ19 270 aaPredicted RBP13.13□□□□□ -0.31
TRAV3-201ENST00000390425 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
TRAV3-201ENST00000390425 RNF180Q86T96 592 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 KATNBL1Q9H079 304 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
TRAV3-201ENST00000390425 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
TRAV3-201ENST00000390425 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 NMT2O60551 498 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
TRAV3-201ENST00000390425 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
TRAV3-201ENST00000390425 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms