RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 GDF15Q99988 308 aa16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 TINF2Q9BSI4 451 aa16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 OSBPL3Q9H4L5 887 aa16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 PFASO15067 1338 aa16.13■□□□□ 0.17
TRBV4-2-201ENST00000390392 CEP290O15078 2479 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 FGRP09769 529 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 SNRNP48Q6IEG0 339 aaKnown RBP16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
TRBV4-2-201ENST00000390392 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 ORC4O43929 436 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 STAT2P52630 851 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRBV4-2-201ENST00000390392 SLC1A4P43007 532 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 NOVP48745 357 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 TKFCQ3LXA3 575 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 RCSD1Q6JBY9 416 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 CNPY2Q9Y2B0 182 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
TRBV4-2-201ENST00000390392 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 HIP1O00291 1037 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 RANBP6O60518 1105 aaKnown RBP16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 FGAP02671 866 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 RARBP10826 455 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 AKR1A1P14550 325 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 NUCB1Q02818 461 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 LRRC26Q2I0M4 334 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 RNF180Q86T96 592 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 TTC14Q96N46 770 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 PRKAG2Q9UGJ0 569 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
TRBV4-2-201ENST00000390392 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 FOXP2O15409 715 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 PGK2P07205 417 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 SLC39A5Q6ZMH5 540 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 ZMYND8Q9ULU4 1186 aaPredicted RBP16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
TRBV4-2-201ENST00000390392 SDSP20132 328 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 MCCP23508 829 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 LRRC41Q15345 812 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 RAVER2Q9HCJ3 691 aaKnown RBP16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 XPNPEP3Q9NQH7 507 aa16.07■□□□□ 0.16
TRBV4-2-201ENST00000390392 CCDC171Q6TFL3 1326 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 IGHDP01880 384 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 ZNF865P0CJ78 1059 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 SYN1P17600 705 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 DCAF4Q8WV16 495 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
TRBV4-2-201ENST00000390392 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 SNX17Q15036 470 aa16.05■□□□□ 0.16
TRBV4-2-201ENST00000390392 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms