RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 LARSQ9P2J5 1176 aaKnown RBP11.41□□□□□ -0.58
PKP4-201ENST00000389757 MTUS1Q9ULD2 1270 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 MADDQ8WXG6 1647 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 ASNSP08243 561 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 SLC16A2P36021 539 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 MCAMP43121 646 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 LIG4P49917 911 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
PKP4-201ENST00000389757 AOC3Q16853 763 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 BRD1O95696 1058 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
PKP4-201ENST00000389757 CCDC122Q5T0U0 273 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 C2orf69Q8N8R5 385 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 SPOPO43791 374 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 BCRP11274 1271 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 CDK8P49336 464 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 POLGP54098 1239 aaPredicted RBP11.41□□□□□ -0.58
PKP4-201ENST00000389757 SCRN1Q12765 414 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 CEP112Q8N8E3 955 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 MED14O60244 1454 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 ADCK5Q3MIX3 580 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 SEL1L2Q5TEA6 688 aa11.41□□□□□ -0.58
PKP4-201ENST00000389757 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 NR1I2O75469 434 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 GNA14O95837 355 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 YWHAEP62258 255 aaKnown RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 FANCCQ00597 558 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.58
PKP4-201ENST00000389757 ZNF569Q5MCW4 686 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 LRCH2Q5VUJ6 765 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 MYOCDQ8IZQ8 938 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 PPP1R14CQ8TAE6 165 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 ATP6V0A1Q93050 837 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 NACA2Q9H009 215 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 TAB2Q9NYJ8 693 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 PFKFB1P16118 471 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 FBXO18Q8NFZ0 1043 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 CCDC84Q86UT8 332 aaPredicted RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 FAM178BQ8IXR5 827 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 SREK1Q8WXA9 508 aaKnown RBP11.4□□□□□ -0.58
PKP4-201ENST00000389757 PIGSQ96S52 555 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
PKP4-201ENST00000389757 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.59
PKP4-201ENST00000389757 K7ENM7 598 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 HSF2BPO75031 334 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 MRPS9P82933 396 aaKnown RBP11.4□□□□□ -0.59
PKP4-201ENST00000389757 SLC9C1Q4G0N8 1177 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 SP8Q8IXZ3 490 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 CDHR1Q96JP9 859 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 IQCGQ9H095 443 aaKnown RBP11.4□□□□□ -0.59
PKP4-201ENST00000389757 DLC1Q96QB1 1528 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 RGS12O14924 1447 aa11.4□□□□□ -0.59
PKP4-201ENST00000389757 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.59
PKP4-201ENST00000389757 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 IGBP1P78318 339 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 MTX1Q13505 466 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 RABGAP1Q9Y3P9 1069 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 UBXN2AP68543 259 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 PTGDRQ13258 359 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 TICAM2Q86XR7 235 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 STAMBPO95630 424 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
PKP4-201ENST00000389757 ERCC3P19447 782 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 PRDX5P30044 214 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 CYP2J2P51589 502 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 CACNB3P54284 484 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 YARSP54577 528 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 DMP1Q13316 513 aaPredicted RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 RTEL1Q9NZ71 1219 aa11.39□□□□□ -0.59
PKP4-201ENST00000389757 GCFC2P16383 781 aaKnown RBP11.39□□□□□ -0.59
PKP4-201ENST00000389757 CYP4A11Q02928 519 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms