RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TTLL12Q14166 644 aaPredicted RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 NSUN4Q96CB9 384 aaKnown RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 FAM212AQ96EL1 285 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 MXD3Q9BW11 206 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 VWA3AA6NCI4 1184 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 AKR1B15C9JRZ8 316 aaPredicted RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 H2AFXP16104 143 aaPredicted RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 MB21D2Q8IYB1 491 aaPredicted RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 TBC1D16Q8TBP0 767 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 FRMD3A2A2Y4 597 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 GPKOWQ92917 476 aaPredicted RBP eCLIP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 NAPGQ99747 312 aaPredicted RBP21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 A0A1B0GUA9 196 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 YEATS4O95619 227 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 FGFR2P21802 821 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 ZNF446Q9NWS9 450 aa21.1■□□□□ 0.97
PPFIA1-202ENST00000389547 TADA3O75528 432 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 TUBB4BP68371 445 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 FRMPD2Q68DX3 1309 aaPredicted RBP21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 RNF40O75150 1001 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 MAATS1Q7Z4T9 603 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 LRRN4CLQ8ND94 238 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 CXorf56Q9H5V9 222 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 CALML3P27482 149 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 PRKG1Q13976 671 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 LETM2Q2VYF4 491 aa21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 EPB41L4AQ9HCS5 686 aaPredicted RBP21.09■□□□□ 0.97
PPFIA1-202ENST00000389547 FAM196BA6NMK8 535 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 ATP1A3P13637 1013 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 SRGAP1Q7Z6B7 1085 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 ABCB6Q9NP58 842 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 CEP83Q9Y592 693 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 CCDC121Q6ZUS5 278 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 TCP11L1Q9NUJ3 509 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 SAMM50Q9Y512 469 aa21.08■□□□□ 0.97
PPFIA1-202ENST00000389547 OPA1O60313 960 aa21.08■□□□□ 0.96
PPFIA1-202ENST00000389547 COA1Q9GZY4 146 aa21.08■□□□□ 0.96
PPFIA1-202ENST00000389547 SENP2Q9HC62 589 aa21.08■□□□□ 0.96
PPFIA1-202ENST00000389547 IDEP14735 1019 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 NDUFA8P51970 172 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 GNGT1P63211 74 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 AOC3Q16853 763 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 TMC4Q7Z404 712 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 SUPT20HQ8NEM7 779 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 CLIC4Q9Y696 253 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 GOLGA6BA6NDN3 693 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 B4GALNT4Q76KP1 1039 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 FBXO33Q7Z6M2 555 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 C6orf50Q9HD87 102 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 RFX7Q2KHR2 1363 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 PPFIA4O75335 1185 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 SLC1A4P43007 532 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 CPVLQ9H3G5 476 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 NFE2L3Q9Y4A8 694 aa21.07■□□□□ 0.96
PPFIA1-202ENST00000389547 PAFAH1B1P43034 410 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 NR5A1Q13285 461 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 RILPL1Q5EBL4 403 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 TRMT44Q8IYL2 757 aaKnown RBP21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 TTLL6Q8N841 843 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 IGSF22Q8N9C0 903 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 KRI1Q8N9T8 703 aaKnown RBP21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 MRC1P22897 1456 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 KLRF2D3W0D1 207 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 CASP8Q14790 479 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 MED4Q9NPJ6 270 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 FANCLQ9NW38 375 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 PCDHA7Q9UN72 937 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 RGPD1P0DJD0 1748 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 EXOSC10Q01780 885 aaKnown RBP21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 ARMCX5Q6P1M9 558 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 YY1AP1Q9H869 796 aa21.06■□□□□ 0.96
PPFIA1-202ENST00000389547 PLEKHG2Q9H7P9 1386 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 CDC27P30260 824 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 CKAP4Q07065 602 aaKnown RBP21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 TAX1BP1Q86VP1 789 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 TULP2O00295 520 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 HLTFQ14527 1009 aaKnown RBP eCLIP21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 WDR78Q5VTH9 848 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 STAMQ92783 540 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 IQCB1Q15051 598 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 VGLL2Q8N8G2 317 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 CLIC6Q96NY7 704 aa21.05■□□□□ 0.96
PPFIA1-202ENST00000389547 LIFRP42702 1097 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 SPECC1LQ69YQ0 1117 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 CUL5Q93034 780 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 SERPINB13Q9UIV8 391 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 PLEKHA8P1O95397 391 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 SPA17Q15506 151 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 STAG1Q8WVM7 1258 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 CDC23Q9UJX2 597 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 LMO7Q8WWI1 1683 aa21.04■□□□□ 0.96
PPFIA1-202ENST00000389547 USP17L2Q6R6M4 530 aa21.03■□□□□ 0.96
PPFIA1-202ENST00000389547 NOSTRINQ8IVI9 506 aa21.03■□□□□ 0.96
PPFIA1-202ENST00000389547 SP8Q8IXZ3 490 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms