RNA–Protein interactions for RNA: ENST00000388782.8

GKAP1-204, Transcript of G kinase anchoring protein 1, human

TSL 2

Gene GKAP1, Length 1,231 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GKAP1-204	ENST00000388782	LBX1	P52954	281 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	BTNL9	Q6UXG8	535 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	RAB11FIP4	Q86YS3	637 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	LZTS2	Q9BRK4	669 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	PPP1R9A	Q9ULJ8	1098 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	TPCN1	Q9ULQ1	816 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	LIMCH1	Q9UPQ0	1083 aa		28.83	■■■□□ 2.21
GKAP1-204	ENST00000388782	TAF1C	Q15572	869 aa	Predicted RBP	28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	NOL8	Q76FK4	1167 aa	Known RBP	28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	CCDC144CP	Q8IYA2	1237 aa		28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	PRPF38A	Q8NAV1	312 aa	Known RBP	28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	SMCR8	Q8TEV9	937 aa	Predicted RBP	28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	LARP6	Q9BRS8	491 aa	Known RBP	28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	FBXO28	Q9NVF7	368 aa		28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	HPS5	Q9UPZ3	1129 aa		28.82	■■■□□ 2.2
GKAP1-204	ENST00000388782	KLRF2	D3W0D1	207 aa		28.81	■■■□□ 2.2
GKAP1-204	ENST00000388782	DSG3	P32926	999 aa		28.81	■■■□□ 2.2
GKAP1-204	ENST00000388782	HERVK_113	P62684	666 aa		28.81	■■■□□ 2.2
GKAP1-204	ENST00000388782	STAG2	Q8N3U4	1231 aa		28.81	■■■□□ 2.2
GKAP1-204	ENST00000388782	SPDYE16	A6NNV3	312 aa	Predicted RBP	28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	FDX1	P10109	184 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	SYDE2	Q5VT97	1194 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	TTBK2	Q6IQ55	1244 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	LBX2	Q6XYB7	198 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	KIFC2	Q96AC6	838 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	ZSCAN31	Q96LW9	406 aa	Predicted RBP	28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	SLK	Q9H2G2	1235 aa	Predicted RBP	28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	ZFYVE28	Q9HCC9	887 aa		28.8	■■■□□ 2.2
GKAP1-204	ENST00000388782	RLF	Q13129	1914 aa		28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	CA12	O43570	354 aa		28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	CYP2C8	P10632	490 aa		28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	GCLC	P48506	637 aa	Predicted RBP	28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	MB21D1	Q8N884	522 aa		28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	P2RX7	Q99572	595 aa	Known RBP	28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782		A0A0G2JMZ2	1700 aa		28.79	■■■□□ 2.2
GKAP1-204	ENST00000388782	PFKFB2	O60825	505 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	SMARCA1	P28370	1054 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	SLC16A2	P36021	539 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	SAMD1	Q6SPF0	538 aa	Predicted RBP	28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	TMTC3	Q6ZXV5	915 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	SH2B1	Q9NRF2	756 aa	Predicted RBP	28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	SAGE1	Q9NXZ1	904 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	PRR12	Q9ULL5	1215 aa		28.78	■■■□□ 2.2
GKAP1-204	ENST00000388782	STK3	Q13188	491 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	ATG4C	Q96DT6	458 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	SPZ1	Q9BXG8	430 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	CFHR5	Q9BXR6	569 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	UBA5	Q9GZZ9	404 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	ADAMTS5	Q9UNA0	930 aa		28.77	■■■□□ 2.2
GKAP1-204	ENST00000388782	VWA5A	O00534	786 aa		28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	DHX16	O60231	1041 aa	Known RBP	28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	CCT2	P78371	535 aa	Known RBP	28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	ME3	Q16798	604 aa		28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	RNF186	Q9NXI6	227 aa		28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	CTDP1	Q9Y5B0	961 aa	Predicted RBP	28.76	■■■□□ 2.19
GKAP1-204	ENST00000388782	ADGRA2	Q96PE1	1338 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	TLR2	O60603	784 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	ZBED4	O75132	1171 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	PLEKHA8P1	O95397	391 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	HSPA8	P11142	646 aa	Known RBP	28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	CDC27	P30260	824 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	CRHR2	Q13324	411 aa		28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	CPLX2	Q6PUV4	134 aa	Known RBP	28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	FAM217B	Q9NTX9	383 aa	Predicted RBP	28.75	■■■□□ 2.19
GKAP1-204	ENST00000388782	CPLX1	O14810	134 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	CD2BP2	O95400	341 aa	Known RBP	28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	LARGE1	O95461	756 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	ADGRF4	Q8IZF3	695 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	GTF3C6	Q969F1	213 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	RANBP17	Q9H2T7	1088 aa	Known RBP	28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	CPVL	Q9H3G5	476 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	RIOX1	Q9H6W3	641 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	SLC38A10	Q9HBR0	1119 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	RABGAP1	Q9Y3P9	1069 aa		28.74	■■■□□ 2.19
GKAP1-204	ENST00000388782	ADD1	P35611	737 aa	Known RBP	28.73	■■■□□ 2.19
GKAP1-204	ENST00000388782	SCRN1	Q12765	414 aa		28.73	■■■□□ 2.19
GKAP1-204	ENST00000388782	SRBD1	Q8N5C6	995 aa	Known RBP	28.73	■■■□□ 2.19
GKAP1-204	ENST00000388782	SNX21	Q969T3	373 aa		28.73	■■■□□ 2.19
GKAP1-204	ENST00000388782	NCOA5	Q9HCD5	579 aa	Known RBP	28.73	■■■□□ 2.19
GKAP1-204	ENST00000388782	TRPA1	O75762	1119 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	CDKL5	O76039	1030 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	OAZ1	P54368	228 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	NBPF11	Q86T75	865 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	JMJD4	Q9H9V9	463 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	PNMA2	Q9UL42	364 aa		28.72	■■■□□ 2.19
GKAP1-204	ENST00000388782	CNTNAP5	Q8WYK1	1306 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	CYTH3	O43739	400 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	FAM110C	Q1W6H9	321 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	REPS2	Q8NFH8	660 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	RRP36	Q96EU6	259 aa	Known RBP	28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	PAGR1	Q9BTK6	254 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	MORF4L1	Q9UBU8	362 aa		28.71	■■■□□ 2.19
GKAP1-204	ENST00000388782	ATP2A1	O14983	1001 aa		28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	IFNAR1	P17181	557 aa		28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	CDC37	Q16543	378 aa	Predicted RBP	28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	SLC35G1	Q2M3R5	365 aa		28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	CMTR1	Q8N1G2	835 aa	Known RBP	28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	NECAB1	Q8N987	351 aa		28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	MTMR8	Q96EF0	704 aa		28.7	■■■□□ 2.18
GKAP1-204	ENST00000388782	TMX3	Q96JJ7	454 aa		28.7	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms