RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 L1CAMP32004 1257 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 ADMP35318 185 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 KCNJ6P48051 423 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 AMPD2Q01433 879 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 SNW1Q13573 536 aaKnown RBP7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 PTPROQ16827 1216 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 TKFCQ3LXA3 575 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 FAM209AQ5JX71 171 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 ZNF513Q8N8E2 541 aaPredicted RBP7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 CCDC140Q96MF4 163 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 IER2Q9BTL4 223 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 TRIT1Q9H3H1 467 aaKnown RBP7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 CD2APQ9Y5K6 639 aa7.7□□□□□ -1.18
RNU6-40P-201ENST00000384254 hCG_2014768A0A024R1R8 64 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 PRAMEF1O95521 474 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 ZNF865P0CJ78 1059 aaPredicted RBP7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 POU4F1Q01851 419 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 RNF43Q68DV7 783 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 GTF2IRD2BQ6EKJ0 949 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 ZNF765Q7L2R6 523 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 TMC3Q7Z5M5 1100 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 GTF2IRD2Q86UP8 949 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 ENOX1Q8TC92 643 aaKnown RBP7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 BTN2A2Q8WVV5 523 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 KCTD13Q8WZ19 329 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 EXOC2Q96KP1 924 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 MRGPRX3Q96LB0 322 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 Q96M66 194 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 DBNDD2Q9BQY9 259 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 LGR4Q9BXB1 951 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 OSBPL1AQ9BXW6 950 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 GPATCH2Q9NW75 528 aa7.69□□□□□ -1.18
RNU6-40P-201ENST00000384254 DNAJC25-GNG10A0A024R161 153 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 FAM170BA6NMN3 283 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 GSNP06396 782 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 SNRPB2P08579 225 aaKnown RBP7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 ANAPC15P60006 121 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 YOD1Q5VVQ6 348 aaPredicted RBP7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 GPAT2Q6NUI2 795 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 GATA6Q92908 595 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 NCOA5Q9HCD5 579 aaKnown RBP7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 IFT57Q9NWB7 429 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
RNU6-40P-201ENST00000384254 PLD2O14939 933 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 TBX1O43435 398 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 HOXC12P31275 282 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 IGBP1P78318 339 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 TNK2Q07912 1038 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 NFIAQ12857 509 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 FOXB2Q5VYV0 432 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 NIM1KQ8IY84 436 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 KISS1RQ969F8 398 aaPredicted RBP7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 MFSD3Q96ES6 412 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 HEXIM2Q96MH2 286 aaKnown RBP7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 NKX2-4Q9H2Z4 354 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 SFMBT1Q9UHJ3 866 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 GPR55Q9Y2T6 319 aaPredicted RBP7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 CNTNAP4Q9C0A0 1308 aa7.67□□□□□ -1.18
RNU6-40P-201ENST00000384254 SSU72P8A0A1W2PR75 194 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 CPP00450 1065 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 GRIA2P42262 883 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 NOP2P46087 812 aaKnown RBP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 DPY19L1Q2PZI1 675 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 FNDC3BQ53EP0 1204 aaKnown RBP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 DALRD3Q5D0E6 543 aaKnown RBP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 ZNF655Q8N720 491 aaPredicted RBP7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 DAGLBQ8NCG7 672 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 NINJ1Q92982 152 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 GPR62Q9BZJ7 368 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 LRRC4CQ9HCJ2 640 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 COL4A3BPQ9Y5P4 624 aa7.66□□□□□ -1.18
RNU6-40P-201ENST00000384254 WDR64B1ANS9 1081 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 H0Y8X5 98 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 VAMP4O75379 141 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 RFPL3O75679 317 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 F13BP05160 661 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 CD3EP07766 207 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 ECI1P42126 302 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 CDKAL1Q5VV42 579 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 OSBP2Q969R2 916 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 BRINP2Q9C0B6 783 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 MKNK2Q9HBH9 465 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 TPSG1Q9NRR2 321 aa7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 NOP58Q9Y2X3 529 aaKnown RBP7.65□□□□□ -1.18
RNU6-40P-201ENST00000384254 RAPGEF3O95398 923 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 CNGA1P29973 690 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 MASP1P48740 699 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 GFRA1P56159 465 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 GABREP78334 506 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 RASSF7Q02833 373 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 MAP4K2Q12851 820 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms