RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 ZNF165P49910 485 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 CACNB3P54284 484 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
SEC13-203ENST00000383801 TNFAIP1Q13829 316 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 ANO6Q4KMQ2 910 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 PIK3AP1Q6ZUJ8 805 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.07
SEC13-203ENST00000383801 TUBE1Q9UJT0 475 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 PCDHA6Q9UN73 950 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 PCDHA8Q9Y5H6 950 aa15.49■□□□□ 0.07
SEC13-203ENST00000383801 COL4A5P29400 1685 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 SMCO2A6NFE2 343 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 EEF2P13639 858 aaKnown RBP15.48■□□□□ 0.07
SEC13-203ENST00000383801 PRPHP41219 470 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 ICA1Q05084 483 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 R3HDM1Q15032 1099 aaKnown RBP15.48■□□□□ 0.07
SEC13-203ENST00000383801 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
SEC13-203ENST00000383801 KRBA2Q6ZNG9 492 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
SEC13-203ENST00000383801 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
SEC13-203ENST00000383801 ARFGEF1Q9Y6D6 1849 aa15.48■□□□□ 0.07
SEC13-203ENST00000383801 NFKBIEO00221 500 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 ZBTB5O15062 677 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 VEGFAP15692 232 aaPredicted RBP15.47■□□□□ 0.07
SEC13-203ENST00000383801 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
SEC13-203ENST00000383801 PTGDRQ13258 359 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 CT47A1Q5JQC4 288 aaPredicted RBP15.47■□□□□ 0.07
SEC13-203ENST00000383801 TYW1BQ6NUM6 668 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 CNNM3Q8NE01 707 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.07
SEC13-203ENST00000383801 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.074e-7■□□□□ 8.6
SEC13-203ENST00000383801 CLIC6Q96NY7 704 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 PIGSQ96S52 555 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
SEC13-203ENST00000383801 FZD9O00144 591 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 SLC1A4P43007 532 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 PTGER2P43116 358 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 MRPL12P52815 198 aaKnown RBP15.46■□□□□ 0.07
SEC13-203ENST00000383801 EIF6P56537 245 aaKnown RBP15.46■□□□□ 0.07
SEC13-203ENST00000383801 NONOQ15233 471 aaKnown RBP eCLIP15.46■□□□□ 0.07
SEC13-203ENST00000383801 SLFN13Q68D06 897 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 CEP57L1Q8IYX8 460 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 ADGRF4Q8IZF3 695 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 NAP1L4Q99733 375 aaKnown RBP15.46■□□□□ 0.07
SEC13-203ENST00000383801 UBA5Q9GZZ9 404 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 ARHGEF10LQ9HCE6 1279 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 MYOZ2Q9NPC6 264 aa15.46■□□□□ 0.07
SEC13-203ENST00000383801 F5H6K3 240 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 WNT10BO00744 389 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 NLRP12P59046 1061 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 KLRC3Q07444 240 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 SEMA3FQ13275 785 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 SEPT2Q15019 361 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 ZNF174Q15697 407 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 NT5DC1Q5TFE4 455 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 SIAH1Q8IUQ4 282 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 REXO1Q8N1G1 1221 aaKnown RBP15.46■□□□□ 0.06
SEC13-203ENST00000383801 C4orf32Q8N8J7 132 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 TRIML1Q8N9V2 468 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 CSRNP2Q9H175 543 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 SH2D4AQ9H788 454 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 CBX8Q9HC52 389 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 MTMR7Q9Y216 660 aa15.46■□□□□ 0.06
SEC13-203ENST00000383801 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.06
SEC13-203ENST00000383801 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 TCP10L2B9ZVM9 353 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 PLA2G6O60733 806 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 ATP2B1P20020 1258 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 LONRF3Q496Y0 759 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 AK8Q96MA6 479 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 VAT1LQ9HCJ6 419 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 RIC8AQ9NPQ8 531 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 BCS1LQ9Y276 419 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 TMX2Q9Y320 296 aa15.45■□□□□ 0.06
SEC13-203ENST00000383801 FRMPD2Q68DX3 1309 aaPredicted RBP15.45■□□□□ 0.06
SEC13-203ENST00000383801 FAM205CA6NFA0 338 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 TPM3P06753 285 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 TXLNAP40222 546 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 ADCY7P51828 1080 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 MDM2Q00987 491 aaPredicted RBP15.44■□□□□ 0.06
SEC13-203ENST00000383801 ATP2B2Q01814 1243 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 IQCB1Q15051 598 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 DTHD1Q6ZMT9 781 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 NEK8Q86SG6 692 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 DNAJC25Q9H1X3 360 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 CCDC39Q9UFE4 941 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 PGAP2Q9UHJ9 254 aa15.44■□□□□ 0.06
SEC13-203ENST00000383801 BECN2A8MW95 431 aa15.43■□□□□ 0.06
SEC13-203ENST00000383801 POLR2DO15514 142 aaKnown RBP15.43■□□□□ 0.06
SEC13-203ENST00000383801 GH2P01242 217 aa15.43■□□□□ 0.06
SEC13-203ENST00000383801 SLFN14P0C7P3 912 aa15.43■□□□□ 0.06
SEC13-203ENST00000383801 MCM7P33993 719 aa15.43■□□□□ 0.06
SEC13-203ENST00000383801 SARM1Q6SZW1 724 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms