RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 AFAP1L1Q8TED9 768 aa21.08■□□□□ 0.97
CSPG5-202ENST00000383738 ADAM21Q9UKJ8 722 aa21.08■□□□□ 0.97
CSPG5-202ENST00000383738 ZMYM6O95789 1325 aa21.08■□□□□ 0.96
CSPG5-202ENST00000383738 BACH1O14867 736 aa21.08■□□□□ 0.96
CSPG5-202ENST00000383738 MRPS25P82663 173 aaKnown RBP21.08■□□□□ 0.96
CSPG5-202ENST00000383738 GPR161Q8N6U8 529 aaKnown RBP21.08■□□□□ 0.96
CSPG5-202ENST00000383738 TSG101Q99816 390 aa21.08■□□□□ 0.96
CSPG5-202ENST00000383738 EFCAB8A8MWE9 144 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 TBC1D10BQ4KMP7 808 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 TMEM87AQ8NBN3 555 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 MED23Q9ULK4 1368 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 SLFN13Q68D06 897 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 KANK3Q6NY19 840 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 ENC1O14682 589 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 NONOQ15233 471 aaKnown RBP eCLIP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 ALAS1P13196 640 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 CCDC122Q5T0U0 273 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 PAGR1Q9BTK6 254 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 IRX2Q9BZI1 471 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 DCP1AQ9NPI6 582 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-202ENST00000383738 SERTAD1Q9UHV2 236 aa21.07■□□□□ 0.96
CSPG5-202ENST00000383738 AKR1B10O60218 316 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 BMP15O95972 392 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 ABCB5Q2M3G0 1257 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 TMEM51Q9NW97 253 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 NDUFAB1O14561 156 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 SCG2P13521 617 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 MKRN3Q13064 507 aaKnown RBP21.06■□□□□ 0.96
CSPG5-202ENST00000383738 NCAPH2Q6IBW4 605 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 PLA2G4DQ86XP0 818 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 GINS2Q9Y248 185 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
CSPG5-202ENST00000383738 RPAP1Q9BWH6 1393 aaPredicted RBP21.06■□□□□ 0.96
CSPG5-202ENST00000383738 HPDP32754 393 aaPredicted RBP21.06■□□□□ 0.96
CSPG5-202ENST00000383738 ADCY7P51828 1080 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 EHMT1Q9H9B1 1298 aa21.06■□□□□ 0.96
CSPG5-202ENST00000383738 COL5A2P05997 1499 aaPredicted RBP21.06■□□□□ 0.96
CSPG5-202ENST00000383738 SH2B2O14492 632 aaPredicted RBP21.05■□□□□ 0.96
CSPG5-202ENST00000383738 TECP42680 631 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 IQCEQ6IPM2 695 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 FAM76AQ8TAV0 307 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 TTC14Q96N46 770 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 C3P01024 1663 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 CDK8P49336 464 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 UBXN1Q04323 297 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 GOLPH3LQ9H4A5 285 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 SSR1P43307 286 aaKnown RBP21.05■□□□□ 0.96
CSPG5-202ENST00000383738 ADALQ6DHV7 355 aa21.05■□□□□ 0.96
CSPG5-202ENST00000383738 SEMA3EO15041 775 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 PTGDRQ13258 359 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 GRAMD1CQ8IYS0 662 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 LRWD1Q9UFC0 647 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 HGSO14964 777 aaPredicted RBP21.04■□□□□ 0.96
CSPG5-202ENST00000383738 CTIFO43310 598 aaKnown RBP21.04■□□□□ 0.96
CSPG5-202ENST00000383738 ERMNQ8TAM6 284 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 PIGSQ96S52 555 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 TCHPQ9BT92 498 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 GOPCQ9HD26 462 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 PCDHA1Q9Y5I3 950 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 CCT5P48643 541 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 BLIDQ8IZY5 108 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 PCDHA5Q9Y5H7 936 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 ATP1A2P50993 1020 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 DALRD3Q5D0E6 543 aaKnown RBP21.04■□□□□ 0.96
CSPG5-202ENST00000383738 TBC1D16Q8TBP0 767 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 SNX29Q8TEQ0 813 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 BICD1Q96G01 975 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 FAM204AQ9H8W3 233 aa21.04■□□□□ 0.96
CSPG5-202ENST00000383738 ZNF609O15014 1411 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 SLC27A3Q5K4L6 730 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 ELP1O95163 1332 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 PSMA7O14818 248 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 PRAMEF18Q5VWM3 479 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.03■□□□□ 0.96
CSPG5-202ENST00000383738 PPP1R12BO60237 982 aaPredicted RBP21.03■□□□□ 0.96
CSPG5-202ENST00000383738 ECE2O60344 883 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 KRT9P35527 623 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 SPECC1LQ69YQ0 1117 aa21.03■□□□□ 0.96
CSPG5-202ENST00000383738 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
CSPG5-202ENST00000383738 UBR1Q8IWV7 1749 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 GOLGA6CA6NDK9 693 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 GOLGA6DP0CG33 693 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 CDC27P30260 824 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 CC2D2BQ6DHV5 1058 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 LRRN4CLQ8ND94 238 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 NAPGQ99747 312 aaPredicted RBP21.02■□□□□ 0.96
CSPG5-202ENST00000383738 COA1Q9GZY4 146 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 GOLGA6AQ9NYA3 693 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 TAB2Q9NYJ8 693 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 ADRA2BP18089 450 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 ACTN2P35609 894 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 CYP4A11Q02928 519 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 GBP6Q6ZN66 633 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 TUBB4AP04350 444 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 HARSP12081 509 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms