RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 PCDHB6Q9Y5E3 794 aa12.56□□□□□ -0.4
FAM239A-201ENST00000381108 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
FAM239A-201ENST00000381108 NAPAP54920 295 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 TNFAIP1Q13829 316 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 PTPAQ15257 358 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 NUP88Q99567 741 aaPredicted RBP12.55□□□□□ -0.4
FAM239A-201ENST00000381108 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
FAM239A-201ENST00000381108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
FAM239A-201ENST00000381108 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
FAM239A-201ENST00000381108 CALML3P27482 149 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 ECE1P42892 770 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 TRPM4Q8TD43 1214 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 SH3GLB2Q9NR46 395 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 RNF181Q9P0P0 153 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 A0A1W2PRG0 241 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 F5H6K3 240 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 H7C1D1 291 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 WNT7AO00755 349 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 KLRC3Q07444 240 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
FAM239A-201ENST00000381108 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
FAM239A-201ENST00000381108 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
FAM239A-201ENST00000381108 TNFRSF25Q93038 417 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 MKL1Q969V6 931 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
FAM239A-201ENST00000381108 ESPNB1AK53 854 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 NDUFB10O96000 172 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 ZYXQ15942 572 aaKnown RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 ANGEL2Q5VTE6 544 aaKnown RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 GPC2Q8N158 579 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 TEPSINQ96N21 525 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 CLIC6Q96NY7 704 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 DEFB129Q9H1M3 183 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 TNMDQ9H2S6 317 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 DDX19AQ9NUU7 478 aaKnown RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 GPRC5DQ9NZD1 345 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 EPS15P42566 896 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 MMP14P50281 582 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 NDUFA8P51970 172 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 IKQ13123 557 aaPredicted RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 AXDND1Q5T1B0 1012 aaPredicted RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 JMYQ8N9B5 988 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 COA7Q96BR5 231 aa12.53□□□□□ -0.4
FAM239A-201ENST00000381108 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
FAM239A-201ENST00000381108 ATAD5Q96QE3 1844 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 TRIM75PA6NK02 468 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 TBC1D12O60347 775 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 SMARCA1P28370 1054 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.4
FAM239A-201ENST00000381108 RNF214Q8ND24 703 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 DCAF4Q8WV16 495 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 ARHGEF10LQ9HCE6 1279 aa12.52□□□□□ -0.4
FAM239A-201ENST00000381108 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 A0A1W2PQ27 194 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 A0A1W2PQ64 194 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 KINO60870 393 aaKnown RBP12.52□□□□□ -0.41
FAM239A-201ENST00000381108 PPP6R2O75170 966 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 CAP2P40123 477 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 GRIN1Q05586 938 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 ZNF174Q15697 407 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 MAP3K11Q16584 847 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.41
FAM239A-201ENST00000381108 RBSNQ9H1K0 784 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 GGA3Q9NZ52 723 aa12.52□□□□□ -0.41
FAM239A-201ENST00000381108 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
FAM239A-201ENST00000381108 SNAP25P60880 206 aa12.51□□□□□ -0.41
FAM239A-201ENST00000381108 TTC38Q5R3I4 469 aa12.51□□□□□ -0.41
FAM239A-201ENST00000381108 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
FAM239A-201ENST00000381108 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
FAM239A-201ENST00000381108 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
FAM239A-201ENST00000381108 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
FAM239A-201ENST00000381108 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms