RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SMIM22K7EJ46 135 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 ZBED4O75132 1171 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 FOSL2P15408 326 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 TAL1P17542 331 aaPredicted RBP19.14■□□□□ 0.65
VCX3A-201ENST00000381089 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.65
VCX3A-201ENST00000381089 REPS2Q8NFH8 660 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 TOX2Q96NM4 488 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 PUS7LQ9H0K6 701 aaKnown RBP19.14■□□□□ 0.65
VCX3A-201ENST00000381089 SPC25Q9HBM1 224 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
VCX3A-201ENST00000381089 ACLYP53396 1101 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 GIMAP6Q6P9H5 292 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 CCDC174Q6PII3 467 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 ANKRD33Q7Z3H0 272 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 MYLIPQ8WY64 445 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 ZHX1Q9UKY1 873 aaPredicted RBP19.13■□□□□ 0.65
VCX3A-201ENST00000381089 MROH7Q68CQ1 1323 aa19.13■□□□□ 0.65
VCX3A-201ENST00000381089 SYNRGQ9UMZ2 1314 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 F5H6K3 240 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 ADAMTS4O75173 837 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 KLRC3Q07444 240 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 MAMDC4Q6UXC1 1216 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 ZNF467Q7Z7K2 595 aaPredicted RBP19.12■□□□□ 0.65
VCX3A-201ENST00000381089 GPATCH3Q96I76 525 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 GLT1D1Q96MS3 346 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 NUP88Q99567 741 aaPredicted RBP19.12■□□□□ 0.65
VCX3A-201ENST00000381089 TTYH1Q9H313 450 aaPredicted RBP19.12■□□□□ 0.65
VCX3A-201ENST00000381089 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
VCX3A-201ENST00000381089 MINDY4BA8MYZ0 360 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 ATP2A1O14983 1001 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 DUSP11O75319 330 aaKnown RBP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 NDUFB10O96000 172 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 CHGBP05060 677 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 RASA1P20936 1047 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 ITGB8P26012 769 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 ZNF444Q8N0Y2 327 aaPredicted RBP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 PCSK9Q8NBP7 692 aaKnown RBP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 LENG1Q96BZ8 264 aaPredicted RBP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 STRBPQ96SI9 672 aaKnown RBP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.11■□□□□ 0.65
VCX3A-201ENST00000381089 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 EYSQ5T1H1 3165 aa19.11■□□□□ 0.65
VCX3A-201ENST00000381089 ELP1O95163 1332 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-201ENST00000381089 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-201ENST00000381089 GNAT2P19087 354 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 KCNA10Q16322 511 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 CPXCR1Q8N123 301 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 STK11IPQ8N1F8 1099 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 VTI1AQ96AJ9 217 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 CLIP2Q9UDT6 1046 aa19.1■□□□□ 0.65
VCX3A-201ENST00000381089 GREB1LQ9C091 1923 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-201ENST00000381089 DNAJC25-GNG10A0A024R161 153 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 SNAI1O95863 264 aaPredicted RBP19.09■□□□□ 0.65
VCX3A-201ENST00000381089 TIMP1P01033 207 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 C6orf222P0C671 652 aaPredicted RBP19.09■□□□□ 0.65
VCX3A-201ENST00000381089 TDO2P48775 406 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 LRRFIP1Q32MZ4 808 aaKnown RBP19.09■□□□□ 0.65
VCX3A-201ENST00000381089 KLHDC9Q8NEP7 349 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 APPBP2Q92624 585 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
VCX3A-201ENST00000381089 KIFC2Q96AC6 838 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 FEM1BQ9UK73 627 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 SYNPO2Q9UMS6 1093 aa19.09■□□□□ 0.65
VCX3A-201ENST00000381089 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 APPP05067 770 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
VCX3A-201ENST00000381089 CST5P28325 142 aaPredicted RBP19.08■□□□□ 0.64
VCX3A-201ENST00000381089 OAZ1P54368 228 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 EPHB4P54760 987 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 PPIGQ13427 754 aaKnown RBP eCLIP19.08■□□□□ 0.64
VCX3A-201ENST00000381089 ACVR2BQ13705 512 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 KBTBD3Q8NAB2 608 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 CHST13Q8NET6 341 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.08■□□□□ 0.64
VCX3A-201ENST00000381089 RIPK3Q9Y572 518 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 CDH23Q9H251 3354 aa19.08■□□□□ 0.64
VCX3A-201ENST00000381089 VCANP13611 3396 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 TLR3O15455 904 aaKnown RBP19.07■□□□□ 0.64
VCX3A-201ENST00000381089 TTLL1O95922 423 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 FDX1P10109 184 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 DNAJB2P25686 324 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 MFSD5Q6N075 450 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.64
VCX3A-201ENST00000381089 SLC38A10Q9HBR0 1119 aa19.07■□□□□ 0.64
VCX3A-201ENST00000381089 RAVER2Q9HCJ3 691 aaKnown RBP19.07■□□□□ 0.64
VCX3A-201ENST00000381089 PRUNE2Q8WUY3 3088 aa19.06■□□□□ 0.64
VCX3A-201ENST00000381089 MYH4Q9Y623 1939 aa19.06■□□□□ 0.64
VCX3A-201ENST00000381089 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
VCX3A-201ENST00000381089 RNF113AO15541 343 aaKnown RBP19.06■□□□□ 0.64
VCX3A-201ENST00000381089 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
VCX3A-201ENST00000381089 ASGR1P07306 291 aa19.06■□□□□ 0.64
VCX3A-201ENST00000381089 SLC3A2P08195 630 aaKnown RBP19.06■□□□□ 0.64
VCX3A-201ENST00000381089 CCSAPQ6IQ19 270 aaPredicted RBP19.06■□□□□ 0.64
VCX3A-201ENST00000381089 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms