RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 DHX40Q8IX18 779 aaKnown RBP14.04□□□□□ -0.16
CDX2-201ENST00000381020 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 NOC4LQ9BVI4 516 aaKnown RBP14.04□□□□□ -0.16
CDX2-201ENST00000381020 SLC39A2Q9NP94 309 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 GOLGA6L9A6NEM1 432 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 FOXP2O15409 715 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 RPN1P04843 607 aaKnown RBP14.04□□□□□ -0.16
CDX2-201ENST00000381020 TNNT3P45378 269 aaPredicted RBP14.04□□□□□ -0.16
CDX2-201ENST00000381020 WDR78Q5VTH9 848 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 CSRNP1Q96S65 589 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 TMEM232C9JQI7 657 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 EVCP57679 992 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 HERC4Q5GLZ8 1057 aaPredicted RBP14.04□□□□□ -0.16
CDX2-201ENST00000381020 CNKSR1Q969H4 720 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 FUCA2Q9BTY2 467 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 IKBKBO14920 756 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 TRAPPC10P48553 1259 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 TNIP1Q15025 636 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 FAM217BQ9NTX9 383 aaPredicted RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 PUF60Q9UHX1 559 aaKnown RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 PCDHA12Q9UN75 941 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 BICDL2A1A5D9 508 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 KIF20AO95235 890 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 SP4Q02446 784 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 SPATA1Q5VX52 437 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 CNGA4Q8IV77 575 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 LRRC27Q9C0I9 530 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 FBXO2Q9UK22 296 aaPredicted RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 AKR1B1P15121 316 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 LONP1P36776 959 aaKnown RBP14.03□□□□□ -0.16
CDX2-201ENST00000381020 MORC3Q14149 939 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 PRR16Q569H4 304 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 TRIML1Q8N9V2 468 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 MASTLQ96GX5 879 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 GSDMAQ96QA5 445 aa14.03□□□□□ -0.16
CDX2-201ENST00000381020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDX2-201ENST00000381020 ARHGAP6O43182 974 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 PRKG1Q13976 671 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 PLA2G4DQ86XP0 818 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 LUC7LQ9NQ29 371 aaKnown RBP14.02□□□□□ -0.16
CDX2-201ENST00000381020 JADE2Q9NQC1 790 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 GDAQ9Y2T3 454 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.16
CDX2-201ENST00000381020 IGSF3O75054 1194 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 MATR3P43243 847 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDX2-201ENST00000381020 CUL4BQ13620 913 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 ABCB5Q2M3G0 1257 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 CT47A1Q5JQC4 288 aaPredicted RBP14.02□□□□□ -0.17
CDX2-201ENST00000381020 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 KCNF1Q9H3M0 494 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 POLLQ9UGP5 575 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
CDX2-201ENST00000381020 SKIDA1Q1XH10 827 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 MAEAQ7L5Y9 396 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 SLF1Q9BQI6 1058 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 TMEM260Q9NX78 707 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 LMO7Q8WWI1 1683 aa14.02□□□□□ -0.17
CDX2-201ENST00000381020 KCNJ18B7U540 433 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 PPP1R12BO60237 982 aaPredicted RBP14.01□□□□□ -0.17
CDX2-201ENST00000381020 CRKP46108 304 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 KCNJ12Q14500 433 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 GRIK5Q16478 980 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 MIGA2Q7L4E1 593 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 ARHGEF10LQ9HCE6 1279 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 FAM170AA1A519 330 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 UBXN2AP68543 259 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 CCDC42Q96M95 316 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 SPAG5Q96R06 1193 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
CDX2-201ENST00000381020 CYP4A11Q02928 519 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 AOC3Q16853 763 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 DPF2Q92785 391 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
CDX2-201ENST00000381020 CARD6Q9BX69 1037 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
CDX2-201ENST00000381020 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
CDX2-201ENST00000381020 FLT1P17948 1338 aa14.01□□□□□ -0.17
CDX2-201ENST00000381020 USO1O60763 962 aaKnown RBP14□□□□□ -0.17
CDX2-201ENST00000381020 RCAN1P53805 252 aa14□□□□□ -0.17
CDX2-201ENST00000381020 FAM193AP78312 1265 aa14□□□□□ -0.17
CDX2-201ENST00000381020 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 SEC23AQ15436 765 aa14□□□□□ -0.17
CDX2-201ENST00000381020 TMEM132AQ24JP5 1023 aa14□□□□□ -0.17
CDX2-201ENST00000381020 NBPF11Q86T75 865 aa14□□□□□ -0.17
CDX2-201ENST00000381020 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
CDX2-201ENST00000381020 SALL1Q9NSC2 1324 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms