RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 DTHD1Q6ZMT9 781 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 CCDC42Q96M95 316 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 HAUS8Q9BT25 410 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 FANCAO15360 1455 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
CLCN4-202ENST00000380833 I3L4J1 428 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 STX2P32856 288 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KIF22Q14807 665 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KRT71Q3SY84 523 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 CCDC14Q49A88 953 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KIAA0825Q8IV33 1275 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 NELFCDQ8IXH7 590 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KLC4Q9NSK0 619 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
CLCN4-202ENST00000380833 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 DYDC2Q96IM9 177 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 RHOBTB1O94844 696 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 KRT8P05787 483 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 SCP2P22307 547 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 RSPH3Q86UC2 560 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 CNNM2Q9H8M5 875 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 ANKFY1Q9P2R3 1169 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 LRRIQ3A6PVS8 624 aaPredicted RBP11.81□□□□□ -0.52
CLCN4-202ENST00000380833 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 SH3GL1Q99961 368 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 HOMER3Q9NSC5 361 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 LZTS1Q9Y250 596 aa11.81□□□□□ -0.52
CLCN4-202ENST00000380833 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 RIOK1Q9BRS2 568 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 MORC2Q9Y6X9 1032 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 TRIML2Q8N7C3 387 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 DKK3Q9UBP4 350 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 USP21Q9UK80 565 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 F13A1P00488 732 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 PLCB4Q15147 1175 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 CCDC89Q8N998 374 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 C10orf88Q9H8K7 445 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 ESRRBO95718 433 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 LONRF2Q1L5Z9 754 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 OLFML2BQ68BL8 750 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGAP22Q7Z5H3 698 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 PAWRQ96IZ0 340 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 TIMM10P62072 90 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 SFSWAPQ12872 951 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 RYBPQ8N488 228 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 PDZD8Q8NEN9 1154 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
CLCN4-202ENST00000380833 CDK13Q14004 1512 aaKnown RBP11.8□□□□□ -0.52
CLCN4-202ENST00000380833 BNIP3LO60238 219 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 TMCC1O94876 653 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 CYLC2Q14093 348 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 DAB1O75553 588 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 TSPY1Q01534 308 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 DENND2CQ68D51 928 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 STAMBPL1Q96FJ0 436 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 TRPA1O75762 1119 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 KRT4P19013 534 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 FAM47AQ5JRC9 791 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 CAPN12Q6ZSI9 719 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 METTL14Q9HCE5 456 aaKnown RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 RGS16O15492 202 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 OATP04181 439 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 SDSP20132 328 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 MYO1EQ12965 1108 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 SNX1Q13596 522 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 VPS16Q9H269 839 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 ITGA6P23229 1130 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms