RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 CCDC12Q8WUD4 166 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-202ENST00000380025 PIGSQ96S52 555 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 RIOX1Q9H6W3 641 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 ZNF219Q9P2Y4 722 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-202ENST00000380025 DACH1Q9UI36 760 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 MYO1BO43795 1136 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 FKBP1AP62942 108 aaKnown RBP28.41■■■□□ 2.14
NDEL1-202ENST00000380025 FMR1Q06787 632 aaKnown RBP eCLIP28.41■■■□□ 2.14
NDEL1-202ENST00000380025 DACT2Q5SW24 774 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 KIAA0825Q8IV33 1275 aa28.41■■■□□ 2.14
NDEL1-202ENST00000380025 SEC63Q9UGP8 760 aaKnown RBP28.41■■■□□ 2.14
NDEL1-202ENST00000380025 SIPA1L1O43166 1804 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 SNHG28P0DPA3 235 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 LONP1P36776 959 aaKnown RBP28.4■■■□□ 2.14
NDEL1-202ENST00000380025 EIF6P56537 245 aaKnown RBP28.4■■■□□ 2.14
NDEL1-202ENST00000380025 GSDMDP57764 484 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 DPYDQ12882 1025 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 FRMPD2Q68DX3 1309 aaPredicted RBP28.4■■■□□ 2.14
NDEL1-202ENST00000380025 MRIQ9BWK5 157 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 UBA5Q9GZZ9 404 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 VAT1LQ9HCJ6 419 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 PCDHAC2Q9Y5I4 1007 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 CASP1P29466 404 aa28.4■■■□□ 2.14
NDEL1-202ENST00000380025 HLA-DOAP06340 250 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 ASPRV1Q53RT3 343 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 TMC6Q7Z403 805 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 ZFPM1Q8IX07 1006 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 IQUBQ8NA54 791 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 DPF2Q92785 391 aa28.39■■■□□ 2.14
NDEL1-202ENST00000380025 SMCO2A6NFE2 343 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 TTLL1O95922 423 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 CCZ1BP86790 482 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 CCZ1P86791 482 aaPredicted RBP28.38■■■□□ 2.13
NDEL1-202ENST00000380025 EZH2Q15910 746 aaKnown RBP28.38■■■□□ 2.13
NDEL1-202ENST00000380025 C7orf43Q8WVR3 580 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 CNKSR1Q969H4 720 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 EHD4Q9H223 541 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 PDXDC2PQ6P474 469 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 ENOX1Q8TC92 643 aaKnown RBP28.38■■■□□ 2.13
NDEL1-202ENST00000380025 MED15Q96RN5 788 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 PYM1Q9BRP8 204 aaKnown RBP28.38■■■□□ 2.13
NDEL1-202ENST00000380025 TMEM60Q9H2L4 133 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 C6orf50Q9HD87 102 aa28.38■■■□□ 2.13
NDEL1-202ENST00000380025 MYH4Q9Y623 1939 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 SERPINC1P01008 464 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 GNA11P29992 359 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 UBASH3AP57075 661 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 KRT25Q7Z3Z0 450 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 GSDMAQ96QA5 445 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 CAMKK2Q96RR4 588 aa28.37■■■□□ 2.13
NDEL1-202ENST00000380025 SLURP2P0DP57 97 aa28.36■■■□□ 2.13
NDEL1-202ENST00000380025 HDLBPQ00341 1268 aaKnown RBP28.36■■■□□ 2.13
NDEL1-202ENST00000380025 DNAJC18Q9H819 358 aa28.36■■■□□ 2.13
NDEL1-202ENST00000380025 CBFA2T2O43439 604 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 SKILP12757 684 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 CACNB3P54284 484 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 EN1Q05925 392 aaPredicted RBP28.35■■■□□ 2.13
NDEL1-202ENST00000380025 TRMT44Q8IYL2 757 aaKnown RBP28.35■■■□□ 2.13
NDEL1-202ENST00000380025 NFE2L3Q9Y4A8 694 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 ESYT2A0FGR8 921 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 ZNF18P17022 549 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 AOC3Q16853 763 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 SOGA3Q5TF21 947 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 DTHD1Q6ZMT9 781 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 STAMQ92783 540 aa28.35■■■□□ 2.13
NDEL1-202ENST00000380025 hCG_1984214I3L0E3 225 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 ERCC5P28715 1186 aaPredicted RBP28.34■■■□□ 2.13
NDEL1-202ENST00000380025 ZNF713Q8N859 430 aaPredicted RBP28.34■■■□□ 2.13
NDEL1-202ENST00000380025 MTRQ99707 1265 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 STK32BQ9NY57 414 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 LAD1O00515 517 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 CDC25AP30304 524 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 ZNF543Q08ER8 600 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 NONOQ15233 471 aaKnown RBP eCLIP28.34■■■□□ 2.13
NDEL1-202ENST00000380025 ARMCX5Q6P1M9 558 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 IDI2Q9BXS1 227 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 FAM198AQ9UFP1 575 aa28.34■■■□□ 2.13
NDEL1-202ENST00000380025 CFAP100Q494V2 611 aa28.33■■■□□ 2.13
NDEL1-202ENST00000380025 CT47A1Q5JQC4 288 aaPredicted RBP28.33■■■□□ 2.13
NDEL1-202ENST00000380025 CCDC150Q8NCX0 1101 aa28.33■■■□□ 2.13
NDEL1-202ENST00000380025 GPCPD1Q9NPB8 672 aa28.33■■■□□ 2.13
NDEL1-202ENST00000380025 RGS17Q9UGC6 210 aaPredicted RBP28.33■■■□□ 2.13
NDEL1-202ENST00000380025 MPHOSPH10O00566 681 aaKnown RBP28.33■■■□□ 2.12
NDEL1-202ENST00000380025 CD44P16070 742 aaKnown RBP28.33■■■□□ 2.12
NDEL1-202ENST00000380025 TXLNAP40222 546 aa28.33■■■□□ 2.12
NDEL1-202ENST00000380025 PRPHP41219 470 aa28.33■■■□□ 2.12
NDEL1-202ENST00000380025 RBM5P52756 815 aaKnown RBP eCLIP28.33■■■□□ 2.12
NDEL1-202ENST00000380025 TCP10Q12799 353 aa28.33■■■□□ 2.12
NDEL1-202ENST00000380025 DHX36Q9H2U1 1008 aaKnown RBP28.33■■■□□ 2.12
NDEL1-202ENST00000380025 UQCRHLA0A096LP55 91 aa28.32■■■□□ 2.12
NDEL1-202ENST00000380025 UQCRHP07919 91 aa28.32■■■□□ 2.12
NDEL1-202ENST00000380025 DDTLA6NHG4 134 aaPredicted RBP28.31■■■□□ 2.12
NDEL1-202ENST00000380025 CUL4BQ13620 913 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 KARSQ15046 597 aaKnown RBP28.31■■■□□ 2.12
NDEL1-202ENST00000380025 HSP90AA4PQ58FG1 418 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 PRIMPOLQ96LW4 560 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 CCDC17Q96LX7 622 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 BLZF1Q9H2G9 400 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 INTS13Q9NVM9 706 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 SERPINA10Q9UK55 444 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms