RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRNP-201ENST00000379440 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 PCDHAC2Q9Y5I4 1007 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 CCDC194A0A1B0GVG4 234 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 CDC25AP30304 524 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 INF2Q27J81 1249 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 SPATA20Q8TB22 786 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 LZTS2Q9BRK4 669 aa16.89■□□□□ 0.29
PRNP-201ENST00000379440 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
PRNP-201ENST00000379440 APOBEC3HQ6NTF7 200 aaKnown RBP16.88■□□□□ 0.29
PRNP-201ENST00000379440 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
PRNP-201ENST00000379440 CNPY4Q8N129 248 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 SPZ1Q9BXG8 430 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 SERPINC1P01008 464 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 SKILP12757 684 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 NOVP48745 357 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 NFIAQ12857 509 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 PTPN21Q16825 1174 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
PRNP-201ENST00000379440 CCDC148Q8NFR7 591 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 MED15Q96RN5 788 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
PRNP-201ENST00000379440 CHRNA5P30532 468 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 UBASH3AP57075 661 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 CCZ1BP86790 482 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 CCZ1P86791 482 aaPredicted RBP16.87■□□□□ 0.29
PRNP-201ENST00000379440 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 PIGSQ96S52 555 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
PRNP-201ENST00000379440 RXRBP28702 533 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 NAPAP54920 295 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
PRNP-201ENST00000379440 PDHBP11177 359 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 CACNB3P54284 484 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 TRIML1Q8N9V2 468 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 TMEM60Q9H2L4 133 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 H0YIN7 160 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 NEMFO60524 1076 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 CRKP46108 304 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 E2F4Q16254 413 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 ARMCX5Q6P1M9 558 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
PRNP-201ENST00000379440 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 NFE2L3Q9Y4A8 694 aa16.86■□□□□ 0.29
PRNP-201ENST00000379440 SMCO2A6NFE2 343 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 DPYDQ12882 1025 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
PRNP-201ENST00000379440 ZMYND12Q9H0C1 365 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 BLZF1Q9H2G9 400 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 SHMT1P34896 483 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
PRNP-201ENST00000379440 GALNT17Q6IS24 598 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 SMYD4Q8IYR2 804 aaPredicted RBP16.85■□□□□ 0.29
PRNP-201ENST00000379440 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 QSER1Q2KHR3 1735 aa16.85■□□□□ 0.29
PRNP-201ENST00000379440 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 USP27XA6NNY8 438 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 CLGNO14967 610 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
PRNP-201ENST00000379440 GSDMDP57764 484 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 MTRQ99707 1265 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
PRNP-201ENST00000379440 PP2D1A8MPX8 630 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 PDXDC2PQ6P474 469 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 ENOX1Q8TC92 643 aaKnown RBP16.84■□□□□ 0.29
PRNP-201ENST00000379440 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 DACH1Q9UI36 760 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
PRNP-201ENST00000379440 TCP10Q12799 353 aa16.83■□□□□ 0.29
PRNP-201ENST00000379440 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.29
PRNP-201ENST00000379440 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.29
PRNP-201ENST00000379440 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.29
PRNP-201ENST00000379440 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.29
PRNP-201ENST00000379440 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
PRNP-201ENST00000379440 ECE2O60344 883 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 LONP1P36776 959 aaKnown RBP16.83■□□□□ 0.28
PRNP-201ENST00000379440 RBM5P52756 815 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRNP-201ENST00000379440 KARSQ15046 597 aaKnown RBP16.83■□□□□ 0.28
PRNP-201ENST00000379440 TPD52L1Q16890 204 aaPredicted RBP16.83■□□□□ 0.28
PRNP-201ENST00000379440 KCNG1Q9UIX4 513 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 SLX4Q8IY92 1834 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 STX17P56962 302 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 ATP2B2Q01814 1243 aa16.83■□□□□ 0.28
PRNP-201ENST00000379440 CUL4BQ13620 913 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms