RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 FAAP100Q0VG06 881 aa23.48■■□□□ 1.35
CCDC107-202ENST00000378406 NUP88Q99567 741 aaPredicted RBP23.48■■□□□ 1.35
CCDC107-202ENST00000378406 TSEN34Q9BSV6 310 aaKnown RBP23.48■■□□□ 1.35
CCDC107-202ENST00000378406 ARPP21Q9UBL0 812 aaPredicted RBP23.48■■□□□ 1.35
CCDC107-202ENST00000378406 TMEM265A0A087WTH1 108 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 ACLYP53396 1101 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 ANKRD33Q7Z3H0 272 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 MSL3Q8N5Y2 521 aaKnown RBP23.47■■□□□ 1.35
CCDC107-202ENST00000378406 TOX2Q96NM4 488 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 SLF1Q9BQI6 1058 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 TEX13BQ9BXU2 312 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 TMEM39AQ9NV64 488 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 RIPK3Q9Y572 518 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 SYNRGQ9UMZ2 1314 aa23.47■■□□□ 1.35
CCDC107-202ENST00000378406 SNAI1O95863 264 aaPredicted RBP23.46■■□□□ 1.35
CCDC107-202ENST00000378406 FPGSQ05932 587 aa23.46■■□□□ 1.35
CCDC107-202ENST00000378406 SNRNP48Q6IEG0 339 aaKnown RBP23.46■■□□□ 1.35
CCDC107-202ENST00000378406 CCSAPQ6IQ19 270 aaPredicted RBP23.46■■□□□ 1.35
CCDC107-202ENST00000378406 ZSCAN25Q6NSZ9 544 aa23.46■■□□□ 1.35
CCDC107-202ENST00000378406 KLHDC9Q8NEP7 349 aa23.46■■□□□ 1.35
CCDC107-202ENST00000378406 SYNGAP1Q96PV0 1343 aa23.46■■□□□ 1.35
CCDC107-202ENST00000378406 STARD7Q9NQZ5 370 aa23.46■■□□□ 1.35
CCDC107-202ENST00000378406 DNAJC25-GNG10A0A024R161 153 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 FOSL2P15408 326 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 RASA1P20936 1047 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 MAMDC4Q6UXC1 1216 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 NYAP2Q9P242 653 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 FAM184BQ9ULE4 1060 aa23.45■■□□□ 1.34
CCDC107-202ENST00000378406 F5H6K3 240 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 KLRC3Q07444 240 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 SBK1Q52WX2 424 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 C20orf194Q5TEA3 1177 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 NUP133Q8WUM0 1156 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 DDX11Q96FC9 970 aa23.44■■□□□ 1.34
CCDC107-202ENST00000378406 STRBPQ96SI9 672 aaKnown RBP23.44■■□□□ 1.34
CCDC107-202ENST00000378406 MYADML2A6NDP7 307 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 MOXD2PA6NHM9 499 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 GSG1L2A8MUP6 293 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 DCDC2CA8MYV0 355 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 NDUFB10O96000 172 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 KCNA10Q16322 511 aa23.43■■□□□ 1.34
CCDC107-202ENST00000378406 PRPF38AQ8NAV1 312 aaKnown RBP23.43■■□□□ 1.34
CCDC107-202ENST00000378406 ZHX1Q9UKY1 873 aaPredicted RBP23.43■■□□□ 1.34
CCDC107-202ENST00000378406 ATP2A1O14983 1001 aa23.42■■□□□ 1.34
CCDC107-202ENST00000378406 DUSP11O75319 330 aaKnown RBP23.42■■□□□ 1.34
CCDC107-202ENST00000378406 IRX5P78411 483 aaPredicted RBP23.42■■□□□ 1.34
CCDC107-202ENST00000378406 ZNF467Q7Z7K2 595 aaPredicted RBP23.42■■□□□ 1.34
CCDC107-202ENST00000378406 STK11IPQ8N1F8 1099 aa23.42■■□□□ 1.34
CCDC107-202ENST00000378406 TBX21Q9UL17 535 aa23.42■■□□□ 1.34
CCDC107-202ENST00000378406 SPTBN5Q9NRC6 3674 aaKnown RBP23.42■■□□□ 1.34
CCDC107-202ENST00000378406 IGKV6D-41A0A0C4DH26 115 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.41■■□□□ 1.34
CCDC107-202ENST00000378406 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.41■■□□□ 1.34
CCDC107-202ENST00000378406 ADCY6O43306 1168 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 TIMP1P01033 207 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 DNAJB2P25686 324 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 CST5P28325 142 aaPredicted RBP23.41■■□□□ 1.34
CCDC107-202ENST00000378406 GRIN2CQ14957 1233 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.41■■□□□ 1.34
CCDC107-202ENST00000378406 CPXCR1Q8N123 301 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 FGD4Q96M96 766 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 LRRCC1Q9C099 1032 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 MKNK2Q9HBH9 465 aa23.41■■□□□ 1.34
CCDC107-202ENST00000378406 MCM3APO60318 1980 aa23.4■■□□□ 1.34
CCDC107-202ENST00000378406 MYH4Q9Y623 1939 aa23.4■■□□□ 1.34
CCDC107-202ENST00000378406 SMARCA5O60264 1052 aaPredicted RBP23.4■■□□□ 1.34
CCDC107-202ENST00000378406 SLC4A3P48751 1232 aa23.4■■□□□ 1.34
CCDC107-202ENST00000378406 ACVR2BQ13705 512 aa23.4■■□□□ 1.34
CCDC107-202ENST00000378406 CLIP2Q9UDT6 1046 aa23.4■■□□□ 1.34
CCDC107-202ENST00000378406 ELP1O95163 1332 aa23.39■■□□□ 1.34
CCDC107-202ENST00000378406 MINDY4BA8MYZ0 360 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 ZBED4O75132 1171 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 CDK7P50613 346 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 OSBP2Q969R2 916 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 GLT1D1Q96MS3 346 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.39■■□□□ 1.33
CCDC107-202ENST00000378406 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
CCDC107-202ENST00000378406 SLC38A10Q9HBR0 1119 aa23.39■■□□□ 1.33
CCDC107-202ENST00000378406 RAVER2Q9HCJ3 691 aaKnown RBP23.39■■□□□ 1.33
CCDC107-202ENST00000378406 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.39■■□□□ 1.33
CCDC107-202ENST00000378406 C6orf222P0C671 652 aaPredicted RBP23.38■■□□□ 1.33
CCDC107-202ENST00000378406 MFSD5Q6N075 450 aa23.38■■□□□ 1.33
CCDC107-202ENST00000378406 KBTBD3Q8NAB2 608 aa23.38■■□□□ 1.33
CCDC107-202ENST00000378406 KIFC2Q96AC6 838 aa23.38■■□□□ 1.33
CCDC107-202ENST00000378406 UPF3AQ9H1J1 476 aaKnown RBP23.38■■□□□ 1.33
CCDC107-202ENST00000378406 ABHD16BQ9H3Z7 469 aa23.38■■□□□ 1.33
CCDC107-202ENST00000378406 EPB41L4AQ9HCS5 686 aaPredicted RBP23.38■■□□□ 1.33
CCDC107-202ENST00000378406 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
CCDC107-202ENST00000378406 MROH7Q68CQ1 1323 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 ASGR1P07306 291 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 GJA9P57773 515 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 CCDC144BQ3MJ40 725 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 C16orf59Q7L2K0 433 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 ANKRD35Q8N283 1001 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 USP38Q8NB14 1042 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 PCSK9Q8NBP7 692 aaKnown RBP23.37■■□□□ 1.33
CCDC107-202ENST00000378406 APPBP2Q92624 585 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 MKL1Q969V6 931 aa23.37■■□□□ 1.33
CCDC107-202ENST00000378406 ZNF576Q9H609 170 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms