RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 BTNL9Q6UXG8 535 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 IGDCC4Q8TDY8 1250 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 SH3TC2Q8TF17 1288 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 USP6NLQ92738 828 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 KCNB2Q92953 911 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 ARMC5Q96C12 935 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 GPCPD1Q9NPB8 672 aa24.08■■□□□ 1.45
TRIM13-203ENST00000378183 CCDC85CA6NKD9 419 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 IFIT3O14879 490 aaKnown RBP24.07■■□□□ 1.44
TRIM13-203ENST00000378183 ZBED4O75132 1171 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 PTPREP23469 700 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 SLC16A2P36021 539 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 STAT3P40763 770 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 WDR78Q5VTH9 848 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 RIOX2Q8IUF8 465 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 PRR12Q9ULL5 1215 aa24.07■■□□□ 1.44
TRIM13-203ENST00000378183 ATP2A1O14983 1001 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 REC8O95072 547 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 HSPA4P34932 840 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 IKQ13123 557 aaPredicted RBP24.06■■□□□ 1.44
TRIM13-203ENST00000378183 SLC9C1Q4G0N8 1177 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 NCAPG2Q86XI2 1143 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 NUDT12Q9BQG2 462 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 RAVER2Q9HCJ3 691 aaKnown RBP24.06■■□□□ 1.44
TRIM13-203ENST00000378183 GPHNQ9NQX3 736 aaPredicted RBP24.06■■□□□ 1.44
TRIM13-203ENST00000378183 RIPK3Q9Y572 518 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 SMCHD1A6NHR9 2005 aa24.06■■□□□ 1.44
TRIM13-203ENST00000378183 ZNF236Q9UL36 1845 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 PRC1O43663 620 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 ADCY3O60266 1144 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 SLC25A27O95847 323 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 GOLGA8HP0CJ92 632 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 ELNP15502 786 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 CYP2B6P20813 491 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 GRK4P32298 578 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 SNAP25P60880 206 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 GRB14Q14449 540 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 ADCK5Q3MIX3 580 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 CPXCR1Q8N123 301 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 MROH8Q9H579 483 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 ZNF536O15090 1300 aa24.05■■□□□ 1.44
TRIM13-203ENST00000378183 SLC15A5A6NIM6 579 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 FDX1P10109 184 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 MCM5P33992 734 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 WTAPQ15007 396 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 TMEM67Q5HYA8 995 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 SNRNP48Q6IEG0 339 aaKnown RBP24.04■■□□□ 1.44
TRIM13-203ENST00000378183 PXYLP1Q8TE99 480 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 SOCS4Q8WXH5 440 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 ZNF333Q96JL9 665 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 TEX13BQ9BXU2 312 aa24.04■■□□□ 1.44
TRIM13-203ENST00000378183 CWC22Q9HCG8 908 aaKnown RBP24.04■■□□□ 1.44
TRIM13-203ENST00000378183 ERICH2A1L162 156 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 CAPN15O75808 1086 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 OAZ1P54368 228 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 MAP2K5Q13163 448 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 IFFO2Q5TF58 517 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 SYDE2Q5VT97 1194 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 SLAIN1Q8ND83 568 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 NEK1Q96PY6 1258 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 MTA3Q9BTC8 594 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 USP26Q9BXU7 913 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 CPVLQ9H3G5 476 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 LY9Q9HBG7 655 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 SNX14Q9Y5W7 946 aa24.03■■□□□ 1.44
TRIM13-203ENST00000378183 STRNO43815 780 aa24.02■■□□□ 1.44
TRIM13-203ENST00000378183 ZKSCAN1P17029 563 aaPredicted RBP24.02■■□□□ 1.44
TRIM13-203ENST00000378183 SART3Q15020 963 aaKnown RBP24.02■■□□□ 1.44
TRIM13-203ENST00000378183 GPATCH4Q5T3I0 446 aaKnown RBP24.02■■□□□ 1.44
TRIM13-203ENST00000378183 NBPF11Q86T75 865 aa24.02■■□□□ 1.44
TRIM13-203ENST00000378183 RANBP17Q9H2T7 1088 aaKnown RBP24.02■■□□□ 1.44
TRIM13-203ENST00000378183 CTDP1Q9Y5B0 961 aaPredicted RBP24.02■■□□□ 1.44
TRIM13-203ENST00000378183 IVNS1ABPQ9Y6Y0 642 aa24.02■■□□□ 1.44
TRIM13-203ENST00000378183 SH2B2O14492 632 aaPredicted RBP24.01■■□□□ 1.43
TRIM13-203ENST00000378183 EPB41L2O43491 1005 aaKnown RBP24.01■■□□□ 1.43
TRIM13-203ENST00000378183 XRCC5P13010 732 aaKnown RBP24.01■■□□□ 1.43
TRIM13-203ENST00000378183 RGS2P41220 211 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 EXOSC10Q01780 885 aaKnown RBP24.01■■□□□ 1.43
TRIM13-203ENST00000378183 CCDC174Q6PII3 467 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 TMEM87BQ96K49 555 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 AGBL1Q96MI9 1066 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 LRRC2Q9BYS8 371 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 UBA5Q9GZZ9 404 aa24.01■■□□□ 1.43
TRIM13-203ENST00000378183 PLXNA1Q9UIW2 1896 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 COBLO75128 1261 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 PARP1P09874 1014 aaKnown RBP24■■□□□ 1.43
TRIM13-203ENST00000378183 ADORA2AP29274 412 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 COPB2P35606 906 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 SLC4A3P48751 1232 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 TROAPQ12815 778 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 KRT32Q14532 448 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 CCL14Q16627 93 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 ASPRV1Q53RT3 343 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 ABRAQ8N0Z2 381 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 STAG2Q8N3U4 1231 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 NPLOC4Q8TAT6 608 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 TRIB2Q92519 343 aa24■■□□□ 1.43
TRIM13-203ENST00000378183 HOXC6P09630 235 aa23.99■■□□□ 1.43
TRIM13-203ENST00000378183 TAL1P17542 331 aaPredicted RBP23.99■■□□□ 1.43
TRIM13-203ENST00000378183 MTFR1Q15390 333 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms