RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GOLGA8MH3BSY2 632 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ASPHQ12797 758 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 CFAP57Q96MR6 1250 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 GOLGA8JA6NMD2 632 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 STAT1P42224 750 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 EXOSC10Q01780 885 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TOM1L2Q6ZVM7 507 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ERICH4A6NGS2 130 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 NAALADL2Q58DX5 795 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SPATA5Q8NB90 893 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 EYA3Q99504 573 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ARMCX3Q9UH62 379 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SETBP1Q9Y6X0 1596 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ASPRV1Q53RT3 343 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 GEMIN8Q9NWZ8 242 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 CDK12Q9NYV4 1490 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 POLR3DP05423 398 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 RPL22P35268 128 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 RAB11FIP4Q86YS3 637 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 GUF1Q8N442 669 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF76P36508 570 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 NONOQ15233 471 aaKnown RBP eCLIP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TSPYL6Q8N831 410 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ZSCAN10Q96SZ4 725 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 DNAJC25Q9H1X3 360 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TEDDM1Q5T9Z0 273 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SUPT20HQ8NEM7 779 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ERVK-7P63135 1459 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ARHGAP4P98171 946 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 CAPN11Q9UMQ6 739 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 RTCBQ9Y3I0 505 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SPAG6O75602 509 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SBK1Q52WX2 424 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ISM2Q6H9L7 571 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ABLIM1O14639 778 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ORC4O43929 436 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 GPT2Q8TD30 523 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 MKNK1Q9BUB5 465 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 MAST1Q9Y2H9 1570 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 MYBL1P10243 752 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TRADDQ15628 312 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TANGO6Q9C0B7 1094 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 CCDC8Q9H0W5 538 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 PCDHA7Q9UN72 937 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TBCAO75347 108 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 PCDHA12Q9UN75 941 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 HIP1RO75146 1068 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SCG2P13521 617 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SYCP2LQ5T4T6 812 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF622Q969S3 477 aaKnown RBP eCLIP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ARHGEF18Q6ZSZ5 1173 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 MOXD1Q6UVY6 613 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 DIS3L2Q8IYB7 885 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 NEK9Q8TD19 979 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 CENPTQ96BT3 561 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 POLR2DO15514 142 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 PHBP35232 272 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 MLECQ14165 292 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TBCCQ15814 346 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 WDR44Q5JSH3 913 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 RANBP6O60518 1105 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 DDX25Q9UHL0 483 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 IL9RQ01113 521 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 KIF2CQ99661 725 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ABCC1P33527 1531 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SLC1A1P43005 524 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 RAPGEF1Q13905 1077 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF608Q9ULD9 1512 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 GSTA2P09210 222 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SYNMO15061 1565 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 APOA5Q6Q788 366 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SIKE1Q9BRV8 207 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 DYNC1I2Q13409 638 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 FBXL5Q9UKA1 691 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 CBX1P83916 185 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 NR1I3Q14994 352 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 ADRM1Q16186 407 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 SYT10Q6XYQ8 523 aa5.44□□□□□ -1.54
PCDH9-201ENST00000377861 TRMT10CQ7L0Y3 403 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 LIMA1Q9UHB6 759 aaKnown RBP5.44□□□□□ -1.54
PCDH9-201ENST00000377861 GSTTP1A0A1W2PQM5 241 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ZWINTO95229 277 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 LMOD1P29536 600 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 FOXD4L5Q5VV16 416 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 NYAP1Q6ZVC0 841 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 COG1Q8WTW3 980 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 TSPAN18Q96SJ8 248 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 CNPY2Q9Y2B0 182 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 GTPBP10A4D1E9 387 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 HDLBPQ00341 1268 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 TRIM62Q9BVG3 475 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 LAMB3Q13751 1172 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 XAGE3Q8WTP9 111 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 FAM187AA6NFU0 413 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms