RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 H0YIN7 160 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 ERCC5P28715 1186 aaPredicted RBP22.96■■□□□ 1.27
VSX1-202ENST00000376709 TXLNAP40222 546 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 NAPAP54920 295 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 DPYDQ12882 1025 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 SEC63Q9UGP8 760 aaKnown RBP22.96■■□□□ 1.27
VSX1-202ENST00000376709 MYH8P13535 1937 aa22.95■■□□□ 1.26
VSX1-202ENST00000376709 CHRNA5P30532 468 aa22.95■■□□□ 1.26
VSX1-202ENST00000376709 LONP1P36776 959 aaKnown RBP22.95■■□□□ 1.26
VSX1-202ENST00000376709 INF2Q27J81 1249 aa22.95■■□□□ 1.26
VSX1-202ENST00000376709 FAM177A1Q8N128 213 aaPredicted RBP22.95■■□□□ 1.26
VSX1-202ENST00000376709 RRP36Q96EU6 259 aaKnown RBP22.95■■□□□ 1.26
VSX1-202ENST00000376709 CAMKK2Q96RR4 588 aa22.95■■□□□ 1.26
VSX1-202ENST00000376709 SCNN1DP51172 638 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 E2F4Q16254 413 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 VSTM4Q8IW00 320 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 DBNDD1Q9H9R9 158 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 RIOK3O14730 519 aaKnown RBP22.94■■□□□ 1.26
VSX1-202ENST00000376709 STYK1Q6J9G0 422 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 C4orf32Q8N8J7 132 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 STAMQ92783 540 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 TRMT1Q9NXH9 659 aaKnown RBP22.94■■□□□ 1.26
VSX1-202ENST00000376709 STK32BQ9NY57 414 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 QSER1Q2KHR3 1735 aa22.94■■□□□ 1.26
VSX1-202ENST00000376709 ZNF18P17022 549 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 CT47A1Q5JQC4 288 aaPredicted RBP22.93■■□□□ 1.26
VSX1-202ENST00000376709 KLHL10Q6JEL2 608 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 CCAR2Q8N163 923 aaKnown RBP22.93■■□□□ 1.26
VSX1-202ENST00000376709 ZMYND12Q9H0C1 365 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 VAT1LQ9HCJ6 419 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 KCNQ5Q9NR82 932 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 TMEM232C9JQI7 657 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 DTHD1Q6ZMT9 781 aa22.93■■□□□ 1.26
VSX1-202ENST00000376709 DDX4Q9NQI0 724 aaKnown RBP22.93■■□□□ 1.26
VSX1-202ENST00000376709 ADAMTSL1Q8N6G6 1762 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 USP17L5A8MUK1 530 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 PTPN14Q15678 1187 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 PDXDC2PQ6P474 469 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 C6orf50Q9HD87 102 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 PLIN4Q96Q06 1357 aa22.92■■□□□ 1.26
VSX1-202ENST00000376709 GNA11P29992 359 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 NOVP48745 357 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 GABPAQ06546 454 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 CEP135Q66GS9 1140 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 MED15Q96RN5 788 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 BLZF1Q9H2G9 400 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SAMSN1Q9NSI8 373 aaKnown RBP22.91■■□□□ 1.26
VSX1-202ENST00000376709 MTMR4Q9NYA4 1195 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SERPINB13Q9UIV8 391 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SYNRGQ9UMZ2 1314 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SMCO2A6NFE2 343 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SMARCA1P28370 1054 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 CDC25AP30304 524 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 SOGA3Q5TF21 947 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 RASSF8Q8NHQ8 419 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 ZNF592Q92610 1267 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 TEKT1Q969V4 418 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 KCND1Q9NSA2 647 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 PAXBP1Q9Y5B6 917 aa22.91■■□□□ 1.26
VSX1-202ENST00000376709 PTPN21Q16825 1174 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 SMYD4Q8IYR2 804 aaPredicted RBP22.9■■□□□ 1.26
VSX1-202ENST00000376709 PIGSQ96S52 555 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 INTS13Q9NVM9 706 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 PDHBP11177 359 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 AKR1B1P15121 316 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 CD44P16070 742 aaKnown RBP22.9■■□□□ 1.26
VSX1-202ENST00000376709 STAT6P42226 847 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 EIF6P56537 245 aaKnown RBP22.9■■□□□ 1.26
VSX1-202ENST00000376709 KRT25Q7Z3Z0 450 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 LRRC47Q8N1G4 583 aaKnown RBP22.9■■□□□ 1.26
VSX1-202ENST00000376709 UBA5Q9GZZ9 404 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 PDCL3Q9H2J4 239 aa22.9■■□□□ 1.26
VSX1-202ENST00000376709 FRMPD2Q68DX3 1309 aaPredicted RBP22.9■■□□□ 1.26
VSX1-202ENST00000376709 LAD1O00515 517 aa22.89■■□□□ 1.26
VSX1-202ENST00000376709 KARSQ15046 597 aaKnown RBP22.89■■□□□ 1.26
VSX1-202ENST00000376709 NYAP1Q6ZVC0 841 aa22.89■■□□□ 1.26
VSX1-202ENST00000376709 CCDC112Q8NEF3 446 aa22.89■■□□□ 1.26
VSX1-202ENST00000376709 TMEM60Q9H2L4 133 aa22.89■■□□□ 1.26
VSX1-202ENST00000376709 SWAP70Q9UH65 585 aa22.89■■□□□ 1.26
VSX1-202ENST00000376709 GTPBP6O43824 516 aaPredicted RBP22.89■■□□□ 1.25
VSX1-202ENST00000376709 STX17P56962 302 aa22.89■■□□□ 1.25
VSX1-202ENST00000376709 CUL4BQ13620 913 aa22.89■■□□□ 1.25
VSX1-202ENST00000376709 NONOQ15233 471 aaKnown RBP eCLIP22.89■■□□□ 1.25
VSX1-202ENST00000376709 SPATA1Q5VX52 437 aa22.89■■□□□ 1.25
VSX1-202ENST00000376709 E4F1Q66K89 784 aaPredicted RBP22.89■■□□□ 1.25
VSX1-202ENST00000376709 HHIPL2Q6UWX4 724 aa22.89■■□□□ 1.25
VSX1-202ENST00000376709 PODNQ7Z5L7 613 aa22.89■■□□□ 1.25
VSX1-202ENST00000376709 KCNJ6P48051 423 aa22.88■■□□□ 1.25
VSX1-202ENST00000376709 CDC42EP5Q6NZY7 148 aa22.88■■□□□ 1.25
VSX1-202ENST00000376709 DISC1Q9NRI5 854 aa22.88■■□□□ 1.25
VSX1-202ENST00000376709 HLA-DOAP06340 250 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 UBA7P41226 1012 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 LETM2Q2VYF4 491 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 ASPRV1Q53RT3 343 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 MTRQ99707 1265 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
VSX1-202ENST00000376709 PPP1R3GB7ZBB8 358 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 ECE2O60344 883 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms