RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 FERMT2Q96AC1 680 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 SYNPO2Q9UMS6 1093 aa22.02■■□□□ 1.12
HDAC6-202ENST00000376610 TTLL1O95922 423 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 TSPY3P0CV98 308 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 TSPY8P0CW00 308 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 SNX17Q15036 470 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 TRIM60Q495X7 471 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 CPXCR1Q8N123 301 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 KIFC2Q96AC6 838 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 CEP95Q96GE4 821 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 NAPBQ9H115 298 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 FEM1BQ9UK73 627 aa22.01■■□□□ 1.11
HDAC6-202ENST00000376610 IGKV6D-41A0A0C4DH26 115 aa22■■□□□ 1.11
HDAC6-202ENST00000376610 C1orf53Q5VUE5 145 aa22■■□□□ 1.11
HDAC6-202ENST00000376610 MKL1Q969V6 931 aa22■■□□□ 1.11
HDAC6-202ENST00000376610 MTMR4Q9NYA4 1195 aa22■■□□□ 1.11
HDAC6-202ENST00000376610 ISY1Q9ULR0 285 aaKnown RBP22■■□□□ 1.11
HDAC6-202ENST00000376610 PHF24Q9UPV7 400 aa22■■□□□ 1.11
HDAC6-202ENST00000376610 LTBP2Q14767 1821 aa21.99■■□□□ 1.11
HDAC6-202ENST00000376610 ATP2A1O14983 1001 aa21.99■■□□□ 1.11
HDAC6-202ENST00000376610 PPP4R3BQ5MIZ7 849 aa21.99■■□□□ 1.11
HDAC6-202ENST00000376610 FBXO40Q9UH90 709 aa21.99■■□□□ 1.11
HDAC6-202ENST00000376610 SYNGAP1Q96PV0 1343 aa21.99■■□□□ 1.11
HDAC6-202ENST00000376610 PGK1P00558 417 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 TAL1P17542 331 aaPredicted RBP21.98■■□□□ 1.11
HDAC6-202ENST00000376610 MX1P20591 662 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 LRRC47Q8N1G4 583 aaKnown RBP21.98■■□□□ 1.11
HDAC6-202ENST00000376610 ANKRD35Q8N283 1001 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 GMCL1P1Q8NEA9 526 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 MTMR10Q9NXD2 777 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 FAM184BQ9ULE4 1060 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 STXBP5LQ9Y2K9 1186 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 PLIN4Q96Q06 1357 aa21.98■■□□□ 1.11
HDAC6-202ENST00000376610 ZNF865P0CJ78 1059 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-202ENST00000376610 FDX1P10109 184 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 BMP3P12645 472 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 OAZ1P54368 228 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 SLFN13Q68D06 897 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 NEDD1Q8NHV4 660 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
HDAC6-202ENST00000376610 SLC38A10Q9HBR0 1119 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 RAVER2Q9HCJ3 691 aaKnown RBP21.97■■□□□ 1.11
HDAC6-202ENST00000376610 PDLIM7Q9NR12 457 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 ZHX1Q9UKY1 873 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-202ENST00000376610 RIPK3Q9Y572 518 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 PCDHB15Q9Y5E8 787 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 COL6A3P12111 3177 aa21.97■■□□□ 1.11
HDAC6-202ENST00000376610 TLE2Q04725 743 aa21.96■■□□□ 1.11
HDAC6-202ENST00000376610 PPARAQ07869 468 aa21.96■■□□□ 1.11
HDAC6-202ENST00000376610 IKQ13123 557 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-202ENST00000376610 ZMYM1Q5SVZ6 1142 aa21.96■■□□□ 1.11
HDAC6-202ENST00000376610 CHST13Q8NET6 341 aa21.96■■□□□ 1.11
HDAC6-202ENST00000376610 TACC3Q9Y6A5 838 aa21.96■■□□□ 1.11
HDAC6-202ENST00000376610 TFAP4Q01664 338 aa21.95■■□□□ 1.1
HDAC6-202ENST00000376610 FAM109BQ6ICB4 259 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-202ENST00000376610 MAMDC4Q6UXC1 1216 aa21.95■■□□□ 1.1
HDAC6-202ENST00000376610 ZNF467Q7Z7K2 595 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-202ENST00000376610 OTUD7AQ8TE49 926 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-202ENST00000376610 NUP133Q8WUM0 1156 aa21.95■■□□□ 1.1
HDAC6-202ENST00000376610 BADQ92934 168 aa21.95■■□□□ 1.1
HDAC6-202ENST00000376610 TSEN34Q9BSV6 310 aaKnown RBP21.95■■□□□ 1.1
HDAC6-202ENST00000376610 DNAJC25-GNG10A0A024R161 153 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 A0A1W2PQ45 241 aaPredicted RBP21.94■■□□□ 1.1
HDAC6-202ENST00000376610 A0A1W2PQY0 241 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 TMEM232C9JQI7 657 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 CLTBP09497 229 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 STAT2P52630 851 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 CHURC1Q8WUH1 139 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 SPC25Q9HBM1 224 aa21.94■■□□□ 1.1
HDAC6-202ENST00000376610 MOXD2PA6NHM9 499 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 PQBP1O60828 265 aaKnown RBP21.93■■□□□ 1.1
HDAC6-202ENST00000376610 ADAMTS4O75173 837 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 SLC1A4P43007 532 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 ZNF697Q5TEC3 545 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.93■■□□□ 1.1
HDAC6-202ENST00000376610 FAM160B2Q86V87 743 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 LENG1Q96BZ8 264 aaPredicted RBP21.93■■□□□ 1.1
HDAC6-202ENST00000376610 STARD7Q9NQZ5 370 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 SYNRGQ9UMZ2 1314 aa21.93■■□□□ 1.1
HDAC6-202ENST00000376610 CUL9Q8IWT3 2517 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 TRIM43BA6NCK2 446 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 TSPY2A6NKD2 308 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 POTEB2H3BUK9 544 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 DLL1O00548 723 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 SNAI1O95863 264 aaPredicted RBP21.92■■□□□ 1.1
HDAC6-202ENST00000376610 ACVR2BQ13705 512 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 SHHQ15465 462 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 SH3RF1Q7Z6J0 888 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 TRIM43Q96BQ3 446 aaPredicted RBP21.92■■□□□ 1.1
HDAC6-202ENST00000376610 ABHD16BQ9H3Z7 469 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 ACAD9Q9H845 621 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 HOMER2Q9NSB8 354 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.92■■□□□ 1.1
HDAC6-202ENST00000376610 STX8Q9UNK0 236 aa21.92■■□□□ 1.1
HDAC6-202ENST00000376610 MCM3APO60318 1980 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 DCDC2CA8MYV0 355 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 DUSP11O75319 330 aaKnown RBP21.91■■□□□ 1.1
HDAC6-202ENST00000376610 RAG1P15918 1043 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 ACLYP53396 1101 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms