RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SNAI1O95863 264 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 IFIT2P09913 472 aaKnown RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 TIFAQ96CG3 184 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 KIF1BPQ96EK5 621 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.112e-8■■□□□ 12.3
CLCN6-205ENST00000376492 TSEN34Q9BSV6 310 aaKnown RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 GOPCQ9HD26 462 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 RIPK3Q9Y572 518 aa15.76■□□□□ 0.11
CLCN6-205ENST00000376492 SMCHD1A6NHR9 2005 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 DCDC2CA8MYV0 355 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 ADCY6O43306 1168 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 PBX2P40425 430 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 KCNA10Q16322 511 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 TJAP1Q5JTD0 557 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 SNRNP48Q6IEG0 339 aaKnown RBP15.75■□□□□ 0.11
CLCN6-205ENST00000376492 CCSAPQ6IQ19 270 aaPredicted RBP15.75■□□□□ 0.11
CLCN6-205ENST00000376492 KLHDC9Q8NEP7 349 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 SYMPKQ92797 1274 aaKnown RBP15.75■□□□□ 0.11
CLCN6-205ENST00000376492 TOX2Q96NM4 488 aa15.75■□□□□ 0.11
CLCN6-205ENST00000376492 SYNGAP1Q96PV0 1343 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 GRXCR1A8MXD5 290 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 TIMP1P01033 207 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 COPB2P35606 906 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 C16orf59Q7L2K0 433 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 AMOTL1Q8IY63 956 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 CRBNQ96SW2 442 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 SLF1Q9BQI6 1058 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 TEX13BQ9BXU2 312 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 PCDHB15Q9Y5E8 787 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
CLCN6-205ENST00000376492 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
CLCN6-205ENST00000376492 MYH8P13535 1937 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 DNAJC25-GNG10A0A024R161 153 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 MOXD2PA6NHM9 499 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 STK11IPQ8N1F8 1099 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 PPM1EQ8WY54 764 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■■■■ 29.9
CLCN6-205ENST00000376492 DCTPP1Q9H773 170 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 PLXNA1Q9UIW2 1896 aa15.73■□□□□ 0.11
CLCN6-205ENST00000376492 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
CLCN6-205ENST00000376492 ACRP10323 421 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 CSF2RAP15509 400 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 TMEM240Q5SV17 173 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 MFSD5Q6N075 450 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 MAMDC4Q6UXC1 1216 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 MSL3Q8N5Y2 521 aaKnown RBP15.72■□□□□ 0.11
CLCN6-205ENST00000376492 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 FGD4Q96M96 766 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 HAUS7Q99871 368 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
CLCN6-205ENST00000376492 PRDM12Q9H4Q4 367 aa15.72■□□□□ 0.11
CLCN6-205ENST00000376492 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
CLCN6-205ENST00000376492 TNFRSF10AO00220 468 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
CLCN6-205ENST00000376492 NDUFB10O96000 172 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 ASGR1P07306 291 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 ATP5JP18859 108 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 CST5P28325 142 aaPredicted RBP15.71■□□□□ 0.11
CLCN6-205ENST00000376492 CDK7P50613 346 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 PPIGQ13427 754 aaKnown RBP eCLIP15.71■□□□□ 0.113e-7■■■□□ 15.2
CLCN6-205ENST00000376492 AAMPQ13685 434 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 ACVR2BQ13705 512 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 UBE3CQ15386 1083 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 CCDC129Q6ZRS4 1044 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 CPXCR1Q8N123 301 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 GLT1D1Q96MS3 346 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 PPP1R12CQ9BZL4 782 aa15.71■□□□□ 0.11
CLCN6-205ENST00000376492 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.71■□□□□ 0.11
CLCN6-205ENST00000376492 ELP1O95163 1332 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 CHD9Q3L8U1 2897 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 F5H6K3 240 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 RASA1P20936 1047 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 KLRC3Q07444 240 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 CCDC144BQ3MJ40 725 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 RASIP1Q5U651 963 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 LRRCC1Q9C099 1032 aa15.7■□□□□ 0.1
CLCN6-205ENST00000376492 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
CLCN6-205ENST00000376492 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
CLCN6-205ENST00000376492 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
CLCN6-205ENST00000376492 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
CLCN6-205ENST00000376492 MROH7Q68CQ1 1323 aa15.69■□□□□ 0.1
CLCN6-205ENST00000376492 GREB1LQ9C091 1923 aaPredicted RBP15.69■□□□□ 0.1
CLCN6-205ENST00000376492 A0A0U1RQG5 324 aaPredicted RBP15.69■□□□□ 0.1
CLCN6-205ENST00000376492 ARVCFO00192 962 aa15.69■□□□□ 0.1
CLCN6-205ENST00000376492 NEFLP07196 543 aa15.69■□□□□ 0.1
CLCN6-205ENST00000376492 COL9A1P20849 921 aa15.69■□□□□ 0.1
CLCN6-205ENST00000376492 ADGRE1Q14246 886 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms