RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.461e-9■■■□□ 18.9
MDC1-201ENST00000376406 PLCB3Q01970 1234 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 TRMT44Q8IYL2 757 aaKnown RBP12.15□□□□□ -0.46
MDC1-201ENST00000376406 KIFC2Q96AC6 838 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 HOXA7P31268 230 aaPredicted RBP12.15□□□□□ -0.46
MDC1-201ENST00000376406 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 MAPKAPK5Q8IW41 473 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 ANTXR1Q9H6X2 564 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 ARHGEF37A1IGU5 675 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 SMCO2A6NFE2 343 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 ELMSAN1Q6PJG2 1045 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 CLIC4Q9Y696 253 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 AFF2P51816 1311 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
MDC1-201ENST00000376406 CRB1P82279 1406 aa12.15□□□□□ -0.46
MDC1-201ENST00000376406 LIN9Q5TKA1 542 aa12.15□□□□□ -0.47
MDC1-201ENST00000376406 CCDC25Q86WR0 208 aa12.15□□□□□ -0.47
MDC1-201ENST00000376406 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.47
MDC1-201ENST00000376406 FLOT1O75955 427 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 ADCK5Q3MIX3 580 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 GOLGA6CA6NDK9 693 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 SPOPO43791 374 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 GOLGA6DP0CG33 693 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 BCRP11274 1271 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 GCNT3O95395 438 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 WHAMMP3Q1A5X7 153 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 KIDINS220Q9ULH0 1771 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 SMIM23A6NLE4 172 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 IGSF3O75054 1194 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 PROSER3Q2NL68 480 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 HERC4Q5GLZ8 1057 aaPredicted RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 CROCCP2Q86T23 111 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
MDC1-201ENST00000376406 CHRNDQ07001 517 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 POLA2Q14181 598 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 FBF1Q8TES7 1133 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 MIS12Q9H081 205 aa12.14□□□□□ -0.47
MDC1-201ENST00000376406 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 DLC1Q96QB1 1528 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 POLR2MP0CAP2 368 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 SCG2P13521 617 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 LONP1P36776 959 aaKnown RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 ZBTB8OSQ8IWT0 167 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 MYCT1Q8N699 235 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 SLF1Q9BQI6 1058 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 GAS7O60861 476 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 GTF2A1P52655 376 aaPredicted RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 MXRA7P84157 204 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 ODR4Q5SWX8 454 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 IFIH1Q9BYX4 1025 aaKnown RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 MAGEF1Q9HAY2 307 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 TNKSO95271 1327 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 BCAMP50895 628 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 BRD3Q15059 726 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 GOLGA6BA6NDN3 693 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 hCG_1984214I3L0E3 225 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 DTNBO60941 627 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 ANKRD35Q8N283 1001 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
MDC1-201ENST00000376406 AGTPBP1Q9UPW5 1226 aa12.13□□□□□ -0.47
MDC1-201ENST00000376406 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
MDC1-201ENST00000376406 USP17L21D6R901 530 aa12.12□□□□□ -0.47
MDC1-201ENST00000376406 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
MDC1-201ENST00000376406 PAK2Q13177 524 aa12.12□□□□□ -0.47
MDC1-201ENST00000376406 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms