RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 PRPF3O43395 683 aaKnown RBP24.45■■□□□ 1.51
HLA-C-201ENST00000376228 PPFIA3O75145 1194 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 GDF11O95390 407 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 KIF5BP33176 963 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 TAF1CQ15572 869 aaPredicted RBP24.45■■□□□ 1.51
HLA-C-201ENST00000376228 TMTC3Q6ZXV5 915 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 METTL16Q86W50 562 aaKnown RBP24.45■■□□□ 1.51
HLA-C-201ENST00000376228 GPT2Q8TD30 523 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 AFG3L2Q9Y4W6 797 aa24.45■■□□□ 1.51
HLA-C-201ENST00000376228 UBE2HP62256 183 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 JAG1P78504 1218 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 DGKZQ13574 1117 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 MOGSQ13724 837 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 PNMA1Q8ND90 353 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 GDPD2Q9HCC8 539 aa24.45■■□□□ 1.5
HLA-C-201ENST00000376228 IGKV6D-41A0A0C4DH26 115 aa24.44■■□□□ 1.5
HLA-C-201ENST00000376228 KRT40Q6A162 431 aa24.44■■□□□ 1.5
HLA-C-201ENST00000376228 CCDC17Q96LX7 622 aa24.44■■□□□ 1.5
HLA-C-201ENST00000376228 ZNF396Q96N95 335 aaPredicted RBP24.44■■□□□ 1.5
HLA-C-201ENST00000376228 FIBPO43427 364 aa24.43■■□□□ 1.5
HLA-C-201ENST00000376228 GNAQP50148 359 aa24.43■■□□□ 1.5
HLA-C-201ENST00000376228 GRM4Q14833 912 aa24.43■■□□□ 1.5
HLA-C-201ENST00000376228 FAM173BQ6P4H8 233 aa24.43■■□□□ 1.5
HLA-C-201ENST00000376228 TMEM47Q9BQJ4 181 aa24.43■■□□□ 1.5
HLA-C-201ENST00000376228 RBM27Q9P2N5 1060 aaKnown RBP24.43■■□□□ 1.5
HLA-C-201ENST00000376228 A0A0G2JLL6 359 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-201ENST00000376228 CXCL11O14625 94 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 CAPN15O75808 1086 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 SHMT1P34896 483 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 GUCY1B3Q02153 619 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 TRIM29Q14134 588 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 PPP4R3BQ5MIZ7 849 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 PRRT2Q7Z6L0 340 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-201ENST00000376228 AIFM3Q96NN9 605 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.42■■□□□ 1.5
HLA-C-201ENST00000376228 MCOLN1Q9GZU1 580 aa24.42■■□□□ 1.5
HLA-C-201ENST00000376228 FKTNO75072 461 aa24.41■■□□□ 1.5
HLA-C-201ENST00000376228 TOP1P11387 765 aaKnown RBP24.41■■□□□ 1.5
HLA-C-201ENST00000376228 FOSBP53539 338 aa24.41■■□□□ 1.5
HLA-C-201ENST00000376228 GADL1Q6ZQY3 521 aa24.41■■□□□ 1.5
HLA-C-201ENST00000376228 ZFYVE28Q9HCC9 887 aa24.41■■□□□ 1.5
HLA-C-201ENST00000376228 LOC285556D6RIA3 1793 aa24.41■■□□□ 1.5
HLA-C-201ENST00000376228 PDHXO00330 501 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
HLA-C-201ENST00000376228 U2AF2P26368 475 aaKnown RBP eCLIP24.4■■□□□ 1.5
HLA-C-201ENST00000376228 AKAP17AQ02040 695 aaKnown RBP24.4■■□□□ 1.5
HLA-C-201ENST00000376228 SPP2Q13103 211 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 NOM1Q5C9Z4 860 aaKnown RBP24.4■■□□□ 1.5
HLA-C-201ENST00000376228 LEO1Q8WVC0 666 aaPredicted RBP24.4■■□□□ 1.5
HLA-C-201ENST00000376228 RCOR1Q9UKL0 485 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 ZSWIM8A7E2V4 1837 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 CNTNAP5Q8WYK1 1306 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 USP17L5A8MUK1 530 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 PLEKHA8P1O95397 391 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 PKN1Q16512 942 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 GPAT2Q6NUI2 795 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 ANKRD23Q86SG2 305 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 CEP95Q96GE4 821 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 SPATA32Q96LK8 384 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 LZTS2Q9BRK4 669 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 MTMR4Q9NYA4 1195 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 ZBTB21Q9ULJ3 1066 aa24.4■■□□□ 1.5
HLA-C-201ENST00000376228 SMARCA1P28370 1054 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 GUCY1A2P33402 732 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 TATDN1Q6P1N9 297 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 SRBD1Q8N5C6 995 aaKnown RBP24.39■■□□□ 1.49
HLA-C-201ENST00000376228 ZNF280CQ8ND82 737 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 GJB4Q9NTQ9 266 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 TFIP11Q9UBB9 837 aaKnown RBP24.39■■□□□ 1.49
HLA-C-201ENST00000376228 ISY1Q9ULR0 285 aaKnown RBP24.39■■□□□ 1.49
HLA-C-201ENST00000376228 STX8Q9UNK0 236 aa24.39■■□□□ 1.49
HLA-C-201ENST00000376228 PALM3A6NDB9 673 aaPredicted RBP24.38■■□□□ 1.49
HLA-C-201ENST00000376228 GH2P01242 217 aa24.38■■□□□ 1.49
HLA-C-201ENST00000376228 ASNSP08243 561 aa24.38■■□□□ 1.49
HLA-C-201ENST00000376228 AKR1B1P15121 316 aa24.38■■□□□ 1.49
HLA-C-201ENST00000376228 XBP1P17861 261 aa24.38■■□□□ 1.49
HLA-C-201ENST00000376228 CTU1Q7Z7A3 348 aaKnown RBP24.38■■□□□ 1.49
HLA-C-201ENST00000376228 ZCCHC17Q9NP64 241 aaKnown RBP24.38■■□□□ 1.49
HLA-C-201ENST00000376228 MYH4Q9Y623 1939 aa24.38■■□□□ 1.49
HLA-C-201ENST00000376228 MMP1P03956 469 aa24.37■■□□□ 1.49
HLA-C-201ENST00000376228 MYSM1Q5VVJ2 828 aa24.37■■□□□ 1.49
HLA-C-201ENST00000376228 FASTKD5Q7L8L6 764 aaKnown RBP24.37■■□□□ 1.49
HLA-C-201ENST00000376228 CMTR1Q8N1G2 835 aaKnown RBP24.37■■□□□ 1.49
HLA-C-201ENST00000376228 ABHD8Q96I13 439 aa24.37■■□□□ 1.49
HLA-C-201ENST00000376228 GZF1Q9H116 711 aaPredicted RBP24.37■■□□□ 1.49
HLA-C-201ENST00000376228 RTEL1Q9NZ71 1219 aa24.37■■□□□ 1.49
HLA-C-201ENST00000376228 MAD2L2Q9UI95 211 aa24.37■■□□□ 1.49
HLA-C-201ENST00000376228 HMGCS2P54868 508 aa24.36■■□□□ 1.49
HLA-C-201ENST00000376228 SAFBQ15424 915 aaKnown RBP eCLIP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 CERKLQ49MI3 558 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 CAVIN1Q6NZI2 390 aaKnown RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 FAM177A1Q8N128 213 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 CCDC82Q8N4S0 544 aa24.36■■□□□ 1.49
HLA-C-201ENST00000376228 CD99L2Q8TCZ2 262 aa24.36■■□□□ 1.49
HLA-C-201ENST00000376228 SYAP1Q96A49 352 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 FOXP1Q9H334 677 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 AS3MTQ9HBK9 375 aa24.36■■□□□ 1.49
HLA-C-201ENST00000376228 V9GY48 417 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-201ENST00000376228 KIF28PB7ZC32 967 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 TLR2O60603 784 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms