RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 F5H6K3 240 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 LIG1P18858 919 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 PTPREP23469 700 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 KLRC3Q07444 240 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 HPSEQ9Y251 543 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
PDPN-202ENST00000376057 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 RESP18Q5W5W9 173 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 FMR1NBQ8N0W7 255 aaPredicted RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 PIGSQ96S52 555 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 FUCA2Q9BTY2 467 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 LAD1O00515 517 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 SLC1A4P43007 532 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 ARL6IP4Q66PJ3 421 aaKnown RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
PDPN-202ENST00000376057 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
PDPN-202ENST00000376057 PAPPA2Q9BXP8 1791 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 GDF11O95390 407 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 NDUFB10O96000 172 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 EGFRP00533 1210 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 DEFB129Q9H1M3 183 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
PDPN-202ENST00000376057 BMP3P12645 472 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
PDPN-202ENST00000376057 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
PDPN-202ENST00000376057 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 NR1I2O75469 434 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
PDPN-202ENST00000376057 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 SYCE3A1L190 88 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 CAVIN2O95810 425 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDPN-202ENST00000376057 NAPAP54920 295 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 EARS2Q5JPH6 523 aaKnown RBP12.72□□□□□ -0.37
PDPN-202ENST00000376057 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 ZNF341Q9BYN7 854 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 VCPKMTQ9H867 229 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
PDPN-202ENST00000376057 PRPHP41219 470 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 NOL9Q5SY16 702 aaKnown RBP12.71□□□□□ -0.37
PDPN-202ENST00000376057 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 FSIP1Q8NA03 581 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 LPAR1Q92633 364 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 WDR18Q9BV38 432 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 TSPY26PQ9H489 355 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 SCN4AP35499 1836 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
PDPN-202ENST00000376057 C4orf32Q8N8J7 132 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 KIAA1683Q9H0B3 1180 aa12.71□□□□□ -0.37
PDPN-202ENST00000376057 ADCY7P51828 1080 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 TTBK2Q6IQ55 1244 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 SHC4Q6S5L8 630 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 NAP1L4Q99733 375 aaKnown RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 FEM1BQ9UK73 627 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 PHIPQ8WWQ0 1821 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 CCDC194A0A1B0GVG4 234 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 KCTD1Q719H9 257 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 PYM1Q9BRP8 204 aaKnown RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 USP17L10C9JJH3 530 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms