RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.52□□□□□ -0.09
LSM2-208ENST00000375661 A0A1W2PQ45 241 aaPredicted RBP14.52□□□□□ -0.09
LSM2-208ENST00000375661 A0A1W2PQY0 241 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 VWA5AO00534 786 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 PGK1P00558 417 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 ZNF865P0CJ78 1059 aaPredicted RBP14.52□□□□□ -0.09
LSM2-208ENST00000375661 STAT3P40763 770 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 CDK8P49336 464 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 FPGSQ05932 587 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 C12orf60Q5U649 245 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 C16orf86Q6ZW13 317 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 ANKRD33Q7Z3H0 272 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 ARMT1Q9H993 441 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 GOPCQ9HD26 462 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 ZNF214Q9UL59 606 aaPredicted RBP14.52□□□□□ -0.09
LSM2-208ENST00000375661 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
LSM2-208ENST00000375661 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 SYNGAP1Q96PV0 1343 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 MOXD2PA6NHM9 499 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 DCDC2CA8MYV0 355 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 ADAMTS4O75173 837 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 PGK2P07205 417 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 EEF2P13639 858 aaKnown RBP14.51□□□□□ -0.09
LSM2-208ENST00000375661 ITGB8P26012 769 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 ADD2P35612 726 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 CLEC10AQ8IUN9 316 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.51□□□□□ -0.09
LSM2-208ENST00000375661 PRDM6Q9NQX0 595 aa14.51□□□□□ -0.09
LSM2-208ENST00000375661 MROH7Q68CQ1 1323 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 PQBP1O60828 265 aaKnown RBP14.5□□□□□ -0.09
LSM2-208ENST00000375661 MBD4O95243 580 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 CHGBP05060 677 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 EPHB4P54760 987 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 FAAP100Q0VG06 881 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 UBE3CQ15386 1083 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
LSM2-208ENST00000375661 KBTBD3Q8NAB2 608 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 REPS2Q8NFH8 660 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 STARD7Q9NQZ5 370 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 TMEM39AQ9NV64 488 aa14.5□□□□□ -0.09
LSM2-208ENST00000375661 MCM3APO60318 1980 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 USP17L12C9JPN9 530 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 USP17L21D6R901 530 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 PRKAB2O43741 272 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 TAL1P17542 331 aaPredicted RBP14.49□□□□□ -0.09
LSM2-208ENST00000375661 DNAJB2P25686 324 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 CST5P28325 142 aaPredicted RBP14.49□□□□□ -0.09
LSM2-208ENST00000375661 ACLYP53396 1101 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 SLFNL1Q499Z3 407 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 CCDC174Q6PII3 467 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 MAMDC4Q6UXC1 1216 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
LSM2-208ENST00000375661 KLHDC9Q8NEP7 349 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 TEX13BQ9BXU2 312 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 FBXO28Q9NVF7 368 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 FAM184BQ9ULE4 1060 aa14.49□□□□□ -0.09
LSM2-208ENST00000375661 ELP1O95163 1332 aa14.48□□□□□ -0.09
LSM2-208ENST00000375661 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
LSM2-208ENST00000375661 DUSP11O75319 330 aaKnown RBP14.48□□□□□ -0.09
LSM2-208ENST00000375661 TIMP1P01033 207 aa14.48□□□□□ -0.09
LSM2-208ENST00000375661 GSPT1P15170 499 aaKnown RBP14.48□□□□□ -0.09
LSM2-208ENST00000375661 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
LSM2-208ENST00000375661 ARPP21Q9UBL0 812 aaPredicted RBP14.48□□□□□ -0.09
LSM2-208ENST00000375661 EYSQ5T1H1 3165 aa14.48□□□□□ -0.09
LSM2-208ENST00000375661 DNAJC25-GNG10A0A024R161 153 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
LSM2-208ENST00000375661 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 TJAP1Q5JTD0 557 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 FAM83BQ5T0W9 1011 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 CCSAPQ6IQ19 270 aaPredicted RBP14.47□□□□□ -0.09
LSM2-208ENST00000375661 MFSD5Q6N075 450 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.09
LSM2-208ENST00000375661 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
LSM2-208ENST00000375661 EVI5LQ96CN4 794 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 GLT1D1Q96MS3 346 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 SLF1Q9BQI6 1058 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 TBX21Q9UL17 535 aa14.47□□□□□ -0.09
LSM2-208ENST00000375661 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.09
LSM2-208ENST00000375661 CDK7P50613 346 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 KCNA10Q16322 511 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 SNRNP48Q6IEG0 339 aaKnown RBP14.46□□□□□ -0.09
LSM2-208ENST00000375661 CTR9Q6PD62 1173 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 PRPF38AQ8NAV1 312 aaKnown RBP14.46□□□□□ -0.09
LSM2-208ENST00000375661 TIFAQ96CG3 184 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 ZNF576Q9H609 170 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 SPC25Q9HBM1 224 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 NYAP2Q9P242 653 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 SLC4A4Q9Y6R1 1079 aa14.46□□□□□ -0.09
LSM2-208ENST00000375661 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 RNF113AO15541 343 aaKnown RBP14.45□□□□□ -0.1
LSM2-208ENST00000375661 RAD21O60216 631 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 SBK1Q52WX2 424 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 GBF1Q92538 1859 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 RILPL2Q969X0 211 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms