RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CCDC172P0C7W6 258 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 TXLNAP40222 546 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 SARSP49591 514 aaKnown RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 NCAPHQ15003 741 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 TEKT1Q969V4 418 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 RRP36Q96EU6 259 aaKnown RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 PSMD1Q99460 953 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 NRBP1Q9UHY1 535 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 RGPD3A6NKT7 1758 aaPredicted RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 RGPD4Q7Z3J3 1758 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 H0YIN7 160 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 LAD1O00515 517 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 HLA-DOAP06340 250 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 CAPN2P17655 700 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 GNA11P29992 359 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 LONP1P36776 959 aaKnown RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 SATB1Q01826 763 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 LRRC8AQ8IWT6 810 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 OSBPL5Q9H0X9 879 aaPredicted RBP9.31□□□□□ -0.92
UBR4-202ENST00000375224 MAN1B1Q9UKM7 699 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 PYCARDQ9ULZ3 195 aa9.31□□□□□ -0.92
UBR4-202ENST00000375224 CALRP27797 417 aaKnown RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 RXRBP28702 533 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 MORC3Q14149 939 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 ISM2Q6H9L7 571 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 HEATR3Q7Z4Q2 680 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 GOLGA6L1Q8N7Z2 621 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 IQUBQ8NA54 791 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 SYMPKQ92797 1274 aaKnown RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 C6orf50Q9HD87 102 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 USP40Q9NVE5 1235 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 IFNKQ9P0W0 207 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 FANCCQ00597 558 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 SOGA3Q5TF21 947 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 KRT25Q7Z3Z0 450 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 C2CD5Q86YS7 1000 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 FOXP4Q8IVH2 680 aaPredicted RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 PDILTQ8N807 584 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 SPATA20Q8TB22 786 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 DHX58Q96C10 678 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 CEP95Q96GE4 821 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 RASSF4Q9H2L5 321 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 TMX1Q9H3N1 280 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 VWA3AA6NCI4 1184 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 STXBP3O00186 592 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 TULP2O00295 520 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 TNNT1P13805 278 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 ERCC5P28715 1186 aaPredicted RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 HDLBPQ00341 1268 aaKnown RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 GABPAQ06546 454 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 PICALMQ13492 652 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 NBPF20Q3BBV1 942 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 ASPRV1Q53RT3 343 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 WWC2Q6AWC2 1192 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
UBR4-202ENST00000375224 CNKSR1Q969H4 720 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 GSDMAQ96QA5 445 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
UBR4-202ENST00000375224 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
UBR4-202ENST00000375224 SERPINC1P01008 464 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 MCM7P33993 719 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 SSR1P43307 286 aaKnown RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 ORC2Q13416 577 aaPredicted RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 DOK7Q18PE1 504 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 CCDC144BQ3MJ40 725 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 FILIP1Q7Z7B0 1213 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 CACTINQ8WUQ7 758 aaKnown RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 ZMYND12Q9H0C1 365 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 SERPINB13Q9UIV8 391 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 MYH8P13535 1937 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 M0R2N6 131 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 CYTH3O43739 400 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 LMOD1P29536 600 aaPredicted RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 NAPAP54920 295 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 CERS5Q8N5B7 392 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 EPSTI1Q96J88 318 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 CCDC17Q96LX7 622 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 PCDHA6Q9UN73 950 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 PCDHA8Q9Y5H6 950 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 COL11A2P13942 1736 aaPredicted RBP9.29□□□□□ -0.92
UBR4-202ENST00000375224 UBASH3AP57075 661 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 STRIP1Q5VSL9 837 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 PAGE5Q96GU1 130 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 EHD4Q9H223 541 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
UBR4-202ENST00000375224 ESYT2A0FGR8 921 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 FOXN1O15353 648 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 TTLL1O95922 423 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 PRPHP41219 470 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 LRMPQ12912 555 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms