RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
HLA-DOA-202ENST00000374813 ACTN1P12814 892 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 STAT3P40763 770 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 CCL23P55773 120 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 PHOSPHO2Q8TCD6 241 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 ARNTL2Q8WYA1 636 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 UPF3AQ9H1J1 476 aaKnown RBP11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 ABHD16BQ9H3Z7 469 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 CERS4Q9HA82 394 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 ZHX1Q9UKY1 873 aaPredicted RBP11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
HLA-DOA-202ENST00000374813 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 MYADML2A6NDP7 307 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 SHMT1P34896 483 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 ACVR2BQ13705 512 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 KRT40Q6A162 431 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 SLC43A3Q8NBI5 491 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 DDX11Q96FC9 970 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 SLC9A7Q96T83 725 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 NOC4LQ9BVI4 516 aaKnown RBP11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 ADAMTS5Q9UNA0 930 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 A0A0G2JMZ2 1700 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 ZNF318Q5VUA4 2279 aa11.42□□□□□ -0.58
HLA-DOA-202ENST00000374813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 SRGAP3O43295 1099 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 DCXO43602 365 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 NKX3-2P78367 333 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 TAP1Q03518 808 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 GRB10Q13322 594 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 ITGA7Q13683 1181 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 LEXMQ3ZCV2 418 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 CCDC158Q5M9N0 1113 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 ARHGEF10LQ9HCE6 1279 aa11.41□□□□□ -0.58
HLA-DOA-202ENST00000374813 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 EPOPA6NHQ4 379 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 WDR46O15213 610 aaKnown RBP11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 ZEB2O60315 1214 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 CYP2E1P05181 493 aaPredicted RBP11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 CYP7A1P22680 504 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 TTC39AQ5SRH9 613 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 TMX2Q9Y320 296 aa11.4□□□□□ -0.58
HLA-DOA-202ENST00000374813 ZFHX2Q9C0A1 2572 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 VWA5AO00534 786 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 SUPT20HL2P0C7V6 817 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 PLCD1P51178 756 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 G3BP1Q13283 466 aaKnown RBP eCLIP11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 TTLL4Q14679 1199 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 PRRX2Q99811 253 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 WNT8AQ9H1J5 351 aa11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 UBE2ZQ9H832 354 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 COL11A1P12107 1806 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-202ENST00000374813 LPXNO60711 386 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 GABPAQ06546 454 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 CXCL17Q6UXB2 119 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 HERC6Q8IVU3 1022 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 SCLYQ96I15 445 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 ZNF214Q9UL59 606 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
HLA-DOA-202ENST00000374813 ZNF536O15090 1300 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 DNAJC25-GNG10A0A024R161 153 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 CTAGE5O15320 804 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 B4GALT4O60513 344 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 KCNA5P22460 613 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 RFC2P35250 354 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 MTX1Q13505 466 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 MIGA1Q8NAN2 632 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms