RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
ABCA1-202ENST00000374736 SCRN1Q12765 414 aa9.59□□□□□ -0.87
ABCA1-202ENST00000374736 PATL1Q86TB9 770 aaKnown RBP9.59□□□□□ -0.87
ABCA1-202ENST00000374736 CCDC43Q96MW1 224 aaKnown RBP9.59□□□□□ -0.87
ABCA1-202ENST00000374736 NUP88Q99567 741 aaPredicted RBP9.59□□□□□ -0.87
ABCA1-202ENST00000374736 SMARCAD1Q9H4L7 1026 aa9.59□□□□□ -0.87
ABCA1-202ENST00000374736 FBXL5Q9UKA1 691 aa9.59□□□□□ -0.87
ABCA1-202ENST00000374736 NOP56O00567 594 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 FSIP1Q8NA03 581 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 KLHL31Q9H511 634 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 ARL2BPQ9Y2Y0 163 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PIK3CAP42336 1068 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 BNC1Q01954 994 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 HABP4Q5JVS0 413 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TTC39CQ8N584 583 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 KRT23Q9C075 422 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 CLCN6P51797 869 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 SPIDRQ14159 915 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 LRRC36Q1X8D7 754 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 UBTFL6P0CB48 400 aaPredicted RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PTGS2P35354 604 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 MATN2O00339 956 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TXNDC9O14530 226 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 N4BP3O15049 544 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 IDEP14735 1019 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 FAM133BQ5BKY9 247 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 FBXO38Q6PIJ6 1188 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 RSPH1Q8WYR4 309 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 CDKL2Q92772 493 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TUBGCP3Q96CW5 907 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 INTS4Q96HW7 963 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PRR23AA6NEV1 266 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 KANK3Q6NY19 840 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TRAF7Q6Q0C0 670 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 ZYG11AQ6WRX3 759 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM69Q86WT6 500 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 LIMA1Q9UHB6 759 aaKnown RBP9.58□□□□□ -0.88
ABCA1-202ENST00000374736 V9GYQ6 96 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 NPR1P16066 1061 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 FAM9CQ8IZT9 166 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 STKLD1Q8NE28 680 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 COMMD3-BMI1R4GMX3 469 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TMEM110-MUSTN1A8MSY1 372 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 TTI1O43156 1089 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.883e-6■■■□□ 17.2
ABCA1-202ENST00000374736 SERPINB3P29508 390 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
ABCA1-202ENST00000374736 PRR23CQ6ZRP0 262 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 MCRS1Q96EZ8 462 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 MLPHQ9BV36 600 aaPredicted RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 PCDH18Q9HCL0 1135 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM66O15016 1216 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 CLUP10909 449 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 NAF1Q96HR8 494 aaKnown RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 PIH1D3Q9NQM4 214 aaKnown RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM16LQ309B1 348 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 TMEM165Q9HC07 324 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 STMND1H3BQB6 276 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 FESP07332 822 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 AFMP43652 599 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ARHGEF6Q15052 776 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 WASHC4Q2M389 1173 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 IMPG2Q9BZV3 1241 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ZNF304Q9HCX3 659 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 MCM8Q9UJA3 840 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 AP1B1Q10567 949 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ATL3Q6DD88 541 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 CRELD2Q6UXH1 353 aaPredicted RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 RSRC2Q7L4I2 434 aaKnown RBP9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 GAP43P17677 238 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 SRCIN1Q9C0H9 1055 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 B4DLN1 442 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 ZBTB39O15060 712 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 PTGS1P23219 599 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 LONRF2Q1L5Z9 754 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 PANK3Q9H999 370 aa9.57□□□□□ -0.88
ABCA1-202ENST00000374736 MRPS26Q9BYN8 205 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 IFIH1Q9BYX4 1025 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 BICC1Q9H694 974 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 SYNDIG1Q9H7V2 258 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 TCHHQ07283 1943 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 HNRNPH1P31943 449 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms