RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 KCNA10Q16322 511 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 SDR42E1Q8WUS8 393 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 VTI1AQ96AJ9 217 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 DDX11Q96FC9 970 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 ATP8A2Q9NTI2 1148 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 ZHX1Q9UKY1 873 aaPredicted RBP17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 MYH7P12883 1935 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 MCM3APO60318 1980 aa17.88■□□□□ 0.45
CDKN1A-202ENST00000373711 C6orf222P0C671 652 aaPredicted RBP17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 IGFBP4P22692 258 aa17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 RASIP1Q5U651 963 aa17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 FTSJ3Q8IY81 847 aaKnown RBP17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 LENG1Q96BZ8 264 aaPredicted RBP17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 TEX13BQ9BXU2 312 aa17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 ZNF214Q9UL59 606 aaPredicted RBP17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 ZNF532Q9HCE3 1301 aa17.87■□□□□ 0.45
CDKN1A-202ENST00000373711 RAD21O60216 631 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 AAK1Q2M2I8 961 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 ZNF467Q7Z7K2 595 aaPredicted RBP17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 C1QTNF1Q9BXJ1 281 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 SLC28A3Q9HAS3 691 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
CDKN1A-202ENST00000373711 BDP1A6H8Y1 2624 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 ARVCFO00192 962 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 ASGR1P07306 291 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 CSF2RAP15509 400 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 PBX2P40425 430 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 CDK7P50613 346 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 CCSAPQ6IQ19 270 aaPredicted RBP17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 LCORLQ8N3X6 602 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 DYNLL2Q96FJ2 89 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 IL23AQ9NPF7 189 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
CDKN1A-202ENST00000373711 GRXCR1A8MXD5 290 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 CYP2D6P10635 497 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 EEF2P13639 858 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 SNRNP48Q6IEG0 339 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 ZNF365Q70YC5 407 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 HERVK_113Q902F9 699 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 SLF1Q9BQI6 1058 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 ABHD16BQ9H3Z7 469 aa17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 TCF20Q9UGU0 1960 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-202ENST00000373711 MYH4Q9Y623 1939 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 CDK8P49336 464 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 GJA9P57773 515 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 EVX2Q03828 476 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 ACVR2BQ13705 512 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 GNASQ5JWF2 1037 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 C16orf86Q6ZW13 317 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 C16orf59Q7L2K0 433 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 FAM126BQ8IXS8 530 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 REPS2Q8NFH8 660 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 SEZ6LQ9BYH1 1024 aa17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 CXXC1Q9P0U4 656 aaPredicted RBP17.83■□□□□ 0.44
CDKN1A-202ENST00000373711 GOLIM4O00461 696 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 FGBP02675 491 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 ACRP10323 421 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 C12orf60Q5U649 245 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 GREB1LQ9C091 1923 aaPredicted RBP17.82■□□□□ 0.44
CDKN1A-202ENST00000373711 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 DNAJC25-GNG10A0A024R161 153 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 CABYRO75952 493 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 CLASRPQ8N2M8 674 aaKnown RBP17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 EXOC6BQ9Y2D4 811 aa17.81■□□□□ 0.44
CDKN1A-202ENST00000373711 MYADML2A6NDP7 307 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 ATP2A1O14983 1001 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 ZBED4O75132 1171 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 MBD4O95243 580 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 PPP2R2DQ66LE6 453 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 RPUSD2Q8IZ73 545 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 ANKRD35Q8N283 1001 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 PRPF38AQ8NAV1 312 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 HIPK3Q9H422 1215 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 HCN4Q9Y3Q4 1203 aa17.8■□□□□ 0.44
CDKN1A-202ENST00000373711 ARIH1Q9Y4X5 557 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 325.5 ms