RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TRAF5O00463 557 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 ARHGAP6O43182 974 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 AP5Z1O43299 807 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 CTAGE8P0CG41 777 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 CTAGE6Q86UF2 777 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 COL23A1Q86Y22 540 aaPredicted RBP8.75□□□□□ -1.01
HERC4-202ENST00000373700 CTAGE4Q8IX94 777 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 TAF4BQ92750 862 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 SPAG5Q96R06 1193 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 KCNF1Q9H3M0 494 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 PLEKHA4Q9H4M7 779 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 XRN1Q8IZH2 1706 aaKnown RBP8.75□□□□□ -1.01
HERC4-202ENST00000373700 NPR1P16066 1061 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 LIFRP42702 1097 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 USP49Q70CQ1 688 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 NELFCDQ8IXH7 590 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 NOC4LQ9BVI4 516 aaKnown RBP8.75□□□□□ -1.01
HERC4-202ENST00000373700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.75□□□□□ -1.01
HERC4-202ENST00000373700 PAFAH1B1P43034 410 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 TERF1P54274 439 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 ICA1Q05084 483 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 PPP2R3AQ06190 1150 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 PRPF4BQ13523 1007 aaKnown RBP8.75□□□□□ -1.01
HERC4-202ENST00000373700 CNGA4Q8IV77 575 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
HERC4-202ENST00000373700 FERMT2Q96AC1 680 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 LRWD1Q9UFC0 647 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 MAN1B1Q9UKM7 699 aa8.75□□□□□ -1.01
HERC4-202ENST00000373700 SEMA3EO15041 775 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 FGFR1OPO95684 399 aaKnown RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 ETF1P62495 437 aaKnown RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 NONOQ15233 471 aaKnown RBP eCLIP8.74□□□□□ -1.013e-7■■■■□ 23.9
HERC4-202ENST00000373700 ARHGAP27Q6ZUM4 889 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 MASTLQ96GX5 879 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 FAM207AQ9NSI2 230 aaPredicted RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 CHD2O14647 1828 aaKnown RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 HLTFQ14527 1009 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■■□ 23.7
HERC4-202ENST00000373700 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 SHC4Q6S5L8 630 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 NSMFQ6X4W1 530 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 FAM114A1Q8IWE2 563 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 CEP95Q96GE4 821 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 POLD4Q9HCU8 107 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 PPP6R2O75170 966 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 KIF5AQ12840 1032 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 GRIK5Q16478 980 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 UBE2SQ16763 222 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 ODF2Q5BJF6 829 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 SV2BQ7L1I2 683 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 RASGRP2Q7LDG7 609 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 CCDC84Q86UT8 332 aaPredicted RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 CABP7Q86V35 215 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 AMIGO3Q86WK7 504 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 SNX29Q8TEQ0 813 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 FOXP1Q9H334 677 aaPredicted RBP8.74□□□□□ -1.01
HERC4-202ENST00000373700 PPP2R2CQ9Y2T4 447 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 NWD1Q149M9 1564 aa8.74□□□□□ -1.01
HERC4-202ENST00000373700 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 MRPL12P52815 198 aaKnown RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 SYCP3Q8IZU3 236 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 IGDCC4Q8TDY8 1250 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 GOLGA1Q92805 767 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 PPP1R13BQ96KQ4 1090 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 POLLQ9UGP5 575 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 FGFR2P21802 821 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 CASP14P31944 242 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 ADCY7P51828 1080 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 PTPROQ16827 1216 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 SLFN13Q68D06 897 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 SLC39A2Q9NP94 309 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 NLRC4Q9NPP4 1024 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 CNTNAP4Q9C0A0 1308 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 ECE2O60344 883 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 SSR1P43307 286 aaKnown RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 GRIN1Q05586 938 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 PPP2R5BQ15173 497 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 TBC1D10BQ4KMP7 808 aaPredicted RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 DNAJC21Q5F1R6 531 aaKnown RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 PAXIP1Q6ZW49 1069 aaPredicted RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 DPF2Q92785 391 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 TBCAO75347 108 aaKnown RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 ADRA2BP18089 450 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 CRKP46108 304 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 CYP4A11Q02928 519 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 DCAF17Q5H9S7 520 aaPredicted RBP8.73□□□□□ -1.01
HERC4-202ENST00000373700 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 NCAPH2Q6IBW4 605 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 ANKRD13CQ8N6S4 541 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 TTLL6Q8N841 843 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 KCNQ5Q9NR82 932 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms